Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0765 and Dshi_0766 are separated by 77 nucleotides Dshi_0766 and Dshi_0767 are separated by 1 nucleotides Dshi_0767 and Dshi_0768 are separated by 176 nucleotides
Dshi_0765: Dshi_0765 - transcriptional regulator, MarR family (RefSeq), at 773,281 to 773,778
_0765
Dshi_0766: Dshi_0766 - protein of unknown function DUF1194 (RefSeq), at 773,856 to 774,593
_0766
Dshi_0767: Dshi_0767 - Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 774,595 to 775,023
_0767
Dshi_0768: Dshi_0768 - thymidylate synthase, flavin-dependent (RefSeq), at 775,200 to 776,117
_0768
Position (kb)
774
775
776 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 773.621 kb on + strand, within Dshi_0765 at 773.745 kb on + strand at 773.745 kb on + strand at 773.745 kb on + strand at 773.753 kb on - strand at 773.795 kb on - strand at 773.805 kb on - strand at 773.836 kb on + strand at 773.836 kb on + strand at 773.844 kb on - strand at 773.844 kb on - strand at 773.872 kb on - strand at 773.876 kb on + strand at 773.904 kb on + strand at 773.954 kb on - strand, within Dshi_0766 at 773.954 kb on - strand, within Dshi_0766 at 773.954 kb on - strand, within Dshi_0766 at 773.960 kb on + strand, within Dshi_0766 at 773.968 kb on - strand, within Dshi_0766 at 774.004 kb on + strand, within Dshi_0766 at 774.075 kb on - strand, within Dshi_0766 at 774.080 kb on + strand, within Dshi_0766 at 774.199 kb on - strand, within Dshi_0766 at 774.254 kb on + strand, within Dshi_0766 at 774.303 kb on + strand, within Dshi_0766 at 774.531 kb on - strand at 774.537 kb on - strand at 774.539 kb on + strand at 774.539 kb on + strand at 774.542 kb on - strand at 774.542 kb on - strand at 774.542 kb on - strand at 774.575 kb on + strand at 774.646 kb on + strand, within Dshi_0767 at 774.679 kb on + strand, within Dshi_0767 at 774.882 kb on - strand, within Dshi_0767 at 774.911 kb on - strand, within Dshi_0767 at 774.950 kb on - strand, within Dshi_0767 at 774.979 kb on + strand, within Dshi_0767 at 775.065 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.01 mg/ml remove 773,621 + Dshi_0765 0.68 -1.6 773,745 + -2.4 773,745 + -1.8 773,745 + +0.4 773,753 - -0.7 773,795 - -0.6 773,805 - -0.6 773,836 + -0.9 773,836 + -1.2 773,844 - -0.4 773,844 - +2.4 773,872 - -1.2 773,876 + +0.4 773,904 + -0.6 773,954 - Dshi_0766 0.13 +0.2 773,954 - Dshi_0766 0.13 +0.4 773,954 - Dshi_0766 0.13 +1.4 773,960 + Dshi_0766 0.14 -2.8 773,968 - Dshi_0766 0.15 +1.0 774,004 + Dshi_0766 0.20 -0.6 774,075 - Dshi_0766 0.30 -1.3 774,080 + Dshi_0766 0.30 +1.4 774,199 - Dshi_0766 0.46 -1.8 774,254 + Dshi_0766 0.54 +1.8 774,303 + Dshi_0766 0.61 +1.4 774,531 - -2.4 774,537 - -1.4 774,539 + +0.2 774,539 + -2.6 774,542 - +0.4 774,542 - -2.2 774,542 - +1.2 774,575 + +2.4 774,646 + Dshi_0767 0.12 +1.0 774,679 + Dshi_0767 0.20 -0.9 774,882 - Dshi_0767 0.67 +2.4 774,911 - Dshi_0767 0.74 +3.2 774,950 - Dshi_0767 0.83 +1.5 774,979 + Dshi_0767 0.90 -1.0 775,065 + -0.4
Or see this region's nucleotide sequence