Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0751 and Dshi_0752 are separated by 42 nucleotides Dshi_0752 and Dshi_0753 overlap by 13 nucleotides Dshi_0753 and Dshi_0754 are separated by 9 nucleotides
Dshi_0751: Dshi_0751 - protein of unknown function DUF344 (RefSeq), at 761,970 to 762,914
_0751
Dshi_0752: Dshi_0752 - protein of unknown function DUF1007 (RefSeq), at 762,957 to 763,637
_0752
Dshi_0753: Dshi_0753 - high-affinity nickel-transporter (RefSeq), at 763,625 to 764,581
_0753
Dshi_0754: Dshi_0754 - Methyltransferase type 11 (RefSeq), at 764,591 to 765,187
_0754
Position (kb) 762
763
764 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 761.962 kb on - strand at 761.967 kb on + strand at 762.032 kb on - strand at 762.183 kb on - strand, within Dshi_0751 at 762.185 kb on - strand, within Dshi_0751 at 762.187 kb on + strand, within Dshi_0751 at 762.251 kb on - strand, within Dshi_0751 at 762.311 kb on + strand, within Dshi_0751 at 762.319 kb on - strand, within Dshi_0751 at 762.374 kb on - strand, within Dshi_0751 at 762.402 kb on - strand, within Dshi_0751 at 762.423 kb on + strand, within Dshi_0751 at 762.434 kb on + strand, within Dshi_0751 at 762.442 kb on - strand, within Dshi_0751 at 762.554 kb on + strand, within Dshi_0751 at 762.572 kb on + strand, within Dshi_0751 at 762.662 kb on + strand, within Dshi_0751 at 762.664 kb on - strand, within Dshi_0751 at 762.713 kb on - strand, within Dshi_0751 at 762.803 kb on - strand, within Dshi_0751 at 762.846 kb on - strand at 762.864 kb on + strand at 762.880 kb on - strand at 762.984 kb on + strand at 762.986 kb on + strand at 762.986 kb on + strand at 763.094 kb on + strand, within Dshi_0752 at 763.170 kb on - strand, within Dshi_0752 at 763.219 kb on - strand, within Dshi_0752 at 763.342 kb on + strand, within Dshi_0752 at 763.381 kb on + strand, within Dshi_0752 at 763.606 kb on + strand at 764.018 kb on + strand, within Dshi_0753 at 764.130 kb on - strand, within Dshi_0753 at 764.187 kb on + strand, within Dshi_0753 at 764.637 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.01 mg/ml remove 761,962 - -1.6 761,967 + +0.2 762,032 - -0.2 762,183 - Dshi_0751 0.23 +1.2 762,185 - Dshi_0751 0.23 +0.4 762,187 + Dshi_0751 0.23 -4.7 762,251 - Dshi_0751 0.30 +0.4 762,311 + Dshi_0751 0.36 +1.4 762,319 - Dshi_0751 0.37 -1.4 762,374 - Dshi_0751 0.43 +1.1 762,402 - Dshi_0751 0.46 +1.4 762,423 + Dshi_0751 0.48 -0.7 762,434 + Dshi_0751 0.49 +2.0 762,442 - Dshi_0751 0.50 +0.4 762,554 + Dshi_0751 0.62 -3.4 762,572 + Dshi_0751 0.64 -1.2 762,662 + Dshi_0751 0.73 -1.9 762,664 - Dshi_0751 0.73 +0.8 762,713 - Dshi_0751 0.79 -2.3 762,803 - Dshi_0751 0.88 -1.7 762,846 - +0.4 762,864 + -0.9 762,880 - -0.5 762,984 + -1.3 762,986 + -0.9 762,986 + +0.4 763,094 + Dshi_0752 0.20 -3.1 763,170 - Dshi_0752 0.31 +0.4 763,219 - Dshi_0752 0.38 -0.4 763,342 + Dshi_0752 0.57 -0.6 763,381 + Dshi_0752 0.62 +0.4 763,606 + -1.3 764,018 + Dshi_0753 0.41 +0.4 764,130 - Dshi_0753 0.53 -0.4 764,187 + Dshi_0753 0.59 -2.8 764,637 + +3.0
Or see this region's nucleotide sequence