Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0733 and Dshi_0734 overlap by 4 nucleotides Dshi_0734 and Dshi_0735 overlap by 14 nucleotides Dshi_0735 and Dshi_0736 overlap by 4 nucleotides Dshi_0736 and Dshi_0737 are separated by 63 nucleotides Dshi_0737 and Dshi_0738 are separated by 60 nucleotides
Dshi_0733: Dshi_0733 - multiple resistance and pH regulation protein F (RefSeq), at 741,987 to 742,343
_0733
Dshi_0734: Dshi_0734 - monovalent cation/proton antiporter, MnhG/PhaG subunit (RefSeq), at 742,340 to 742,687
_0734
Dshi_0735: Dshi_0735 - hypothetical protein (RefSeq), at 742,674 to 743,288
_0735
Dshi_0736: Dshi_0736 - GCN5-related N-acetyltransferase (RefSeq), at 743,285 to 743,770
_0736
Dshi_0737: Dshi_0737 - heat shock protein DnaJ domain protein (RefSeq), at 743,834 to 744,517
_0737
Dshi_0738: Dshi_0738 - hypothetical protein (RefSeq), at 744,578 to 744,895
_0738
Position (kb) 743
744 Strain fitness (log2 ratio) -2
-1
0
1
2 at 742.375 kb on + strand, within Dshi_0734 at 742.470 kb on + strand, within Dshi_0734 at 742.518 kb on - strand, within Dshi_0734 at 742.578 kb on + strand, within Dshi_0734 at 742.601 kb on + strand, within Dshi_0734 at 742.628 kb on + strand, within Dshi_0734 at 742.629 kb on - strand, within Dshi_0734 at 742.684 kb on - strand at 742.684 kb on - strand at 742.764 kb on - strand, within Dshi_0735 at 742.768 kb on + strand, within Dshi_0735 at 742.778 kb on + strand, within Dshi_0735 at 742.834 kb on + strand, within Dshi_0735 at 742.864 kb on - strand, within Dshi_0735 at 742.942 kb on + strand, within Dshi_0735 at 742.950 kb on - strand, within Dshi_0735 at 743.101 kb on - strand, within Dshi_0735 at 743.165 kb on - strand, within Dshi_0735 at 743.171 kb on + strand, within Dshi_0735 at 743.347 kb on - strand, within Dshi_0736 at 743.397 kb on + strand, within Dshi_0736 at 743.599 kb on - strand, within Dshi_0736 at 743.631 kb on + strand, within Dshi_0736 at 743.639 kb on - strand, within Dshi_0736 at 743.674 kb on - strand, within Dshi_0736 at 743.678 kb on + strand, within Dshi_0736 at 743.686 kb on - strand, within Dshi_0736 at 743.769 kb on + strand at 743.824 kb on + strand at 743.941 kb on - strand, within Dshi_0737 at 744.079 kb on - strand, within Dshi_0737 at 744.110 kb on + strand, within Dshi_0737 at 744.295 kb on + strand, within Dshi_0737 at 744.296 kb on + strand, within Dshi_0737 at 744.457 kb on + strand at 744.521 kb on - strand at 744.557 kb on - strand at 744.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.01 mg/ml remove 742,375 + Dshi_0734 0.10 +2.4 742,470 + Dshi_0734 0.37 +1.1 742,518 - Dshi_0734 0.51 -0.6 742,578 + Dshi_0734 0.68 +0.7 742,601 + Dshi_0734 0.75 +1.4 742,628 + Dshi_0734 0.83 +2.4 742,629 - Dshi_0734 0.83 -0.2 742,684 - +0.4 742,684 - +2.4 742,764 - Dshi_0735 0.15 -1.9 742,768 + Dshi_0735 0.15 +2.4 742,778 + Dshi_0735 0.17 +2.4 742,834 + Dshi_0735 0.26 +0.4 742,864 - Dshi_0735 0.31 +0.6 742,942 + Dshi_0735 0.44 +2.0 742,950 - Dshi_0735 0.45 +1.5 743,101 - Dshi_0735 0.69 -1.0 743,165 - Dshi_0735 0.80 -2.2 743,171 + Dshi_0735 0.81 +0.4 743,347 - Dshi_0736 0.13 +1.0 743,397 + Dshi_0736 0.23 +1.1 743,599 - Dshi_0736 0.65 +0.4 743,631 + Dshi_0736 0.71 -0.7 743,639 - Dshi_0736 0.73 +0.4 743,674 - Dshi_0736 0.80 +1.4 743,678 + Dshi_0736 0.81 +0.8 743,686 - Dshi_0736 0.83 -0.5 743,769 + -1.1 743,824 + -1.1 743,941 - Dshi_0737 0.16 -0.6 744,079 - Dshi_0737 0.36 -2.1 744,110 + Dshi_0737 0.40 -0.2 744,295 + Dshi_0737 0.67 -1.6 744,296 + Dshi_0737 0.68 -0.0 744,457 + -0.8 744,521 - -1.2 744,557 - +2.4 744,605 - +1.4
Or see this region's nucleotide sequence