Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0070
Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
69,776 | + | -0.8 | |||
69,810 | + | -2.0 | |||
69,813 | - | +0.4 | |||
69,825 | - | +2.8 | |||
69,855 | - | Dshi_0069 | 0.12 | -1.2 | |
69,960 | - | Dshi_0069 | 0.24 | +0.4 | |
70,010 | + | Dshi_0069 | 0.29 | -2.3 | |
70,064 | + | Dshi_0069 | 0.35 | -0.2 | |
70,157 | - | Dshi_0069 | 0.46 | -1.6 | |
70,159 | + | Dshi_0069 | 0.46 | +0.2 | |
70,262 | + | Dshi_0069 | 0.58 | +0.0 | |
70,270 | - | Dshi_0069 | 0.59 | +0.4 | |
70,414 | + | Dshi_0069 | 0.75 | +0.4 | |
70,439 | - | Dshi_0069 | 0.78 | +1.2 | |
70,441 | + | Dshi_0069 | 0.78 | +0.3 | |
70,449 | - | Dshi_0069 | 0.79 | +0.0 | |
70,478 | - | Dshi_0069 | 0.82 | -1.3 | |
70,489 | - | Dshi_0069 | 0.84 | -0.6 | |
70,507 | + | Dshi_0069 | 0.86 | -2.2 | |
70,507 | + | Dshi_0069 | 0.86 | -1.4 | |
70,539 | + | Dshi_0069 | 0.89 | +1.0 | |
70,562 | - | +2.4 | |||
70,606 | + | +0.4 | |||
70,606 | + | +3.4 | |||
70,606 | + | +0.8 | |||
70,624 | - | +0.4 | |||
70,668 | + | +2.4 | |||
70,671 | - | +0.6 | |||
70,729 | - | +0.1 | |||
70,879 | + | Dshi_0070 | 0.49 | +2.4 | |
71,067 | - | -0.4 | |||
71,125 | + | -1.9 | |||
71,287 | + | Dshi_0071 | 0.12 | +0.4 | |
71,411 | - | Dshi_0071 | 0.20 | -1.2 | |
71,501 | + | Dshi_0071 | 0.26 | -1.6 | |
71,753 | - | Dshi_0071 | 0.42 | -1.0 | |
71,763 | - | Dshi_0071 | 0.42 | -1.6 | |
71,764 | - | Dshi_0071 | 0.42 | -1.9 | |
71,764 | - | Dshi_0071 | 0.42 | -0.4 | |
71,847 | + | Dshi_0071 | 0.48 | +0.4 |
Or see this region's nucleotide sequence