Experiment: D-Glucosamine Hydrochloride as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_713 and HP15_714 are separated by 2 nucleotides HP15_714 and HP15_715 are separated by 172 nucleotides HP15_715 and HP15_716 are separated by 165 nucleotides
HP15_713: HP15_713 - modification methylase, HemK family, at 722,155 to 723,006
_713
HP15_714: HP15_714 - molybdopterin synthase sulfurylase MoeB, at 723,009 to 723,767
_714
HP15_715: HP15_715 - deoxyribodipyrimidine photolyase, at 723,940 to 725,343
_715
HP15_716: HP15_716 - conserved hypothetical protein, at 725,509 to 726,318
_716
Position (kb) 723
724
725
726 Strain fitness (log2 ratio) -1
0
1
2 at 722.999 kb on - strand at 723.007 kb on - strand at 723.015 kb on + strand at 723.792 kb on + strand at 723.846 kb on - strand at 723.894 kb on - strand at 723.904 kb on - strand at 724.028 kb on + strand at 724.134 kb on + strand, within HP15_715 at 724.354 kb on - strand, within HP15_715 at 724.401 kb on + strand, within HP15_715 at 724.636 kb on - strand, within HP15_715 at 724.712 kb on + strand, within HP15_715 at 724.758 kb on - strand, within HP15_715 at 724.760 kb on - strand, within HP15_715 at 724.794 kb on + strand, within HP15_715 at 724.808 kb on + strand, within HP15_715 at 724.816 kb on - strand, within HP15_715 at 724.898 kb on + strand, within HP15_715 at 724.906 kb on - strand, within HP15_715 at 724.922 kb on - strand, within HP15_715 at 724.997 kb on + strand, within HP15_715 at 725.003 kb on - strand, within HP15_715 at 725.022 kb on + strand, within HP15_715 at 725.022 kb on + strand, within HP15_715 at 725.030 kb on + strand, within HP15_715 at 725.042 kb on + strand, within HP15_715 at 725.055 kb on - strand, within HP15_715 at 725.097 kb on + strand, within HP15_715 at 725.129 kb on - strand, within HP15_715 at 725.156 kb on + strand, within HP15_715 at 725.176 kb on - strand, within HP15_715 at 725.176 kb on - strand, within HP15_715 at 725.259 kb on + strand at 725.468 kb on - strand at 725.548 kb on - strand at 725.553 kb on + strand at 725.561 kb on - strand at 725.575 kb on - strand at 725.595 kb on + strand, within HP15_716 at 725.643 kb on - strand, within HP15_716 at 725.709 kb on + strand, within HP15_716 at 725.868 kb on + strand, within HP15_716 at 725.880 kb on + strand, within HP15_716 at 725.984 kb on - strand, within HP15_716 at 726.080 kb on - strand, within HP15_716 at 726.147 kb on + strand, within HP15_716 at 726.155 kb on - strand, within HP15_716 at 726.155 kb on - strand, within HP15_716 at 726.155 kb on - strand, within HP15_716 at 726.155 kb on - strand, within HP15_716
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride as (N) remove 722,999 - +2.6 723,007 - +2.2 723,015 + +2.1 723,792 + +0.5 723,846 - -0.3 723,894 - -0.2 723,904 - +2.0 724,028 + +2.5 724,134 + HP15_715 0.14 +2.6 724,354 - HP15_715 0.29 +0.3 724,401 + HP15_715 0.33 -0.6 724,636 - HP15_715 0.50 -0.9 724,712 + HP15_715 0.55 -0.2 724,758 - HP15_715 0.58 +2.2 724,760 - HP15_715 0.58 -0.4 724,794 + HP15_715 0.61 +2.2 724,808 + HP15_715 0.62 -0.5 724,816 - HP15_715 0.62 +1.8 724,898 + HP15_715 0.68 +2.1 724,906 - HP15_715 0.69 +0.2 724,922 - HP15_715 0.70 +2.5 724,997 + HP15_715 0.75 +2.2 725,003 - HP15_715 0.76 +2.0 725,022 + HP15_715 0.77 -0.8 725,022 + HP15_715 0.77 +1.8 725,030 + HP15_715 0.78 -0.3 725,042 + HP15_715 0.78 +1.7 725,055 - HP15_715 0.79 -1.2 725,097 + HP15_715 0.82 -0.6 725,129 - HP15_715 0.85 +2.2 725,156 + HP15_715 0.87 +0.1 725,176 - HP15_715 0.88 +2.1 725,176 - HP15_715 0.88 -0.6 725,259 + -1.4 725,468 - -0.4 725,548 - -1.5 725,553 + -0.1 725,561 - -0.7 725,575 - +0.1 725,595 + HP15_716 0.11 +0.0 725,643 - HP15_716 0.17 -1.3 725,709 + HP15_716 0.25 -0.4 725,868 + HP15_716 0.44 -0.3 725,880 + HP15_716 0.46 -0.1 725,984 - HP15_716 0.59 +2.2 726,080 - HP15_716 0.70 +0.2 726,147 + HP15_716 0.79 +1.5 726,155 - HP15_716 0.80 -0.2 726,155 - HP15_716 0.80 +0.1 726,155 - HP15_716 0.80 +1.9 726,155 - HP15_716 0.80 -0.2
Or see this region's nucleotide sequence