Experiment: D-Glucosamine Hydrochloride as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_593 and HP15_594 are separated by 122 nucleotides HP15_594 and HP15_595 are separated by 73 nucleotides HP15_595 and HP15_596 are separated by 203 nucleotides
HP15_593: HP15_593 - protein belonging to uncharacterized protein family UPF0118, at 612,861 to 613,976
_593
HP15_594: HP15_594 - peptidoglycan-binding domain 1 protein-like protein, at 614,099 to 614,518
_594
HP15_595: HP15_595 - dihydroxy-acid dehydratase, at 614,592 to 616,385
_595
HP15_596: HP15_596 - signal transduction protein, at 616,589 to 617,845
_596
Position (kb) 614
615
616
617 Strain fitness (log2 ratio) -1
0
1
2
3 at 613.740 kb on + strand, within HP15_593 at 613.743 kb on - strand, within HP15_593 at 613.782 kb on - strand, within HP15_593 at 613.864 kb on - strand, within HP15_593 at 613.909 kb on + strand at 613.929 kb on + strand at 614.021 kb on - strand at 614.032 kb on + strand at 614.072 kb on + strand at 614.225 kb on + strand, within HP15_594 at 614.225 kb on + strand, within HP15_594 at 614.225 kb on + strand, within HP15_594 at 614.417 kb on + strand, within HP15_594 at 614.715 kb on + strand at 614.875 kb on - strand, within HP15_595 at 614.908 kb on + strand, within HP15_595 at 615.000 kb on + strand, within HP15_595 at 615.027 kb on - strand, within HP15_595 at 615.367 kb on + strand, within HP15_595 at 615.367 kb on + strand, within HP15_595 at 615.367 kb on + strand, within HP15_595 at 615.375 kb on - strand, within HP15_595 at 615.453 kb on + strand, within HP15_595 at 615.491 kb on - strand, within HP15_595 at 615.491 kb on - strand, within HP15_595 at 615.493 kb on + strand, within HP15_595 at 615.596 kb on + strand, within HP15_595 at 615.626 kb on - strand, within HP15_595 at 615.689 kb on + strand, within HP15_595 at 615.702 kb on - strand, within HP15_595 at 615.791 kb on + strand, within HP15_595 at 615.885 kb on + strand, within HP15_595 at 615.934 kb on + strand, within HP15_595 at 616.090 kb on + strand, within HP15_595 at 616.158 kb on - strand, within HP15_595 at 616.303 kb on - strand at 616.450 kb on + strand at 616.453 kb on - strand at 616.587 kb on - strand at 616.628 kb on - strand at 616.630 kb on + strand at 616.712 kb on - strand at 616.917 kb on + strand, within HP15_596 at 616.925 kb on - strand, within HP15_596 at 616.925 kb on - strand, within HP15_596 at 617.130 kb on + strand, within HP15_596 at 617.231 kb on + strand, within HP15_596 at 617.256 kb on + strand, within HP15_596 at 617.296 kb on + strand, within HP15_596 at 617.360 kb on - strand, within HP15_596 at 617.360 kb on - strand, within HP15_596
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride as (N) remove 613,740 + HP15_593 0.79 +2.7 613,743 - HP15_593 0.79 -0.8 613,782 - HP15_593 0.83 +2.7 613,864 - HP15_593 0.90 -0.1 613,909 + -0.3 613,929 + -0.4 614,021 - -0.2 614,032 + +0.5 614,072 + -0.7 614,225 + HP15_594 0.30 +2.3 614,225 + HP15_594 0.30 +2.3 614,225 + HP15_594 0.30 -0.5 614,417 + HP15_594 0.76 +2.3 614,715 + +1.2 614,875 - HP15_595 0.16 +2.7 614,908 + HP15_595 0.18 +3.0 615,000 + HP15_595 0.23 -0.6 615,027 - HP15_595 0.24 +2.1 615,367 + HP15_595 0.43 -0.9 615,367 + HP15_595 0.43 +0.5 615,367 + HP15_595 0.43 -0.5 615,375 - HP15_595 0.44 -0.1 615,453 + HP15_595 0.48 +0.6 615,491 - HP15_595 0.50 +2.4 615,491 - HP15_595 0.50 +2.3 615,493 + HP15_595 0.50 +0.8 615,596 + HP15_595 0.56 +2.0 615,626 - HP15_595 0.58 -1.1 615,689 + HP15_595 0.61 +0.1 615,702 - HP15_595 0.62 +2.1 615,791 + HP15_595 0.67 +2.4 615,885 + HP15_595 0.72 -0.3 615,934 + HP15_595 0.75 +2.3 616,090 + HP15_595 0.84 -1.0 616,158 - HP15_595 0.87 -0.0 616,303 - +2.3 616,450 + -1.1 616,453 - -0.8 616,587 - -0.6 616,628 - -0.6 616,630 + +1.8 616,712 - +0.1 616,917 + HP15_596 0.26 -0.5 616,925 - HP15_596 0.27 -0.3 616,925 - HP15_596 0.27 -0.9 617,130 + HP15_596 0.43 -0.4 617,231 + HP15_596 0.51 -1.3 617,256 + HP15_596 0.53 -0.5 617,296 + HP15_596 0.56 +2.0 617,360 - HP15_596 0.61 +0.1 617,360 - HP15_596 0.61 +0.2
Or see this region's nucleotide sequence