Strain Fitness in Marinobacter adhaerens HP15 around HP15_3096

Experiment: D-Glucosamine Hydrochloride as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3095 and HP15_3096 are separated by 18 nucleotidesHP15_3096 and HP15_3097 are separated by 2 nucleotides HP15_3095: HP15_3095 - phage-related membrane protein, at 3,251,087 to 3,252,250 _3095 HP15_3096: HP15_3096 - membrane protein, at 3,252,269 to 3,252,532 _3096 HP15_3097: HP15_3097 - hypothetical protein, at 3,252,535 to 3,253,833 _3097 Position (kb) 3252 3253Strain fitness (log2 ratio) -1 0 1 2at 3251.382 kb on + strand, within HP15_3095at 3251.522 kb on + strand, within HP15_3095at 3251.529 kb on - strand, within HP15_3095at 3251.564 kb on - strand, within HP15_3095at 3251.658 kb on + strand, within HP15_3095at 3251.770 kb on - strand, within HP15_3095at 3251.858 kb on + strand, within HP15_3095at 3251.919 kb on - strand, within HP15_3095at 3252.101 kb on - strand, within HP15_3095at 3252.103 kb on + strand, within HP15_3095at 3252.111 kb on - strand, within HP15_3095at 3252.201 kb on + strandat 3252.226 kb on + strandat 3252.234 kb on - strandat 3252.363 kb on + strand, within HP15_3096at 3252.373 kb on + strand, within HP15_3096at 3252.397 kb on + strand, within HP15_3096at 3252.534 kb on + strandat 3252.568 kb on + strandat 3252.673 kb on + strand, within HP15_3097at 3252.687 kb on - strand, within HP15_3097at 3252.716 kb on - strand, within HP15_3097at 3252.746 kb on - strand, within HP15_3097at 3252.792 kb on - strand, within HP15_3097at 3252.792 kb on - strand, within HP15_3097at 3252.810 kb on - strand, within HP15_3097at 3252.812 kb on - strand, within HP15_3097at 3252.898 kb on + strand, within HP15_3097at 3252.913 kb on - strand, within HP15_3097at 3252.953 kb on - strand, within HP15_3097at 3253.008 kb on + strand, within HP15_3097at 3253.046 kb on + strand, within HP15_3097at 3253.069 kb on - strand, within HP15_3097at 3253.122 kb on - strand, within HP15_3097at 3253.240 kb on + strand, within HP15_3097at 3253.285 kb on + strand, within HP15_3097at 3253.293 kb on - strand, within HP15_3097at 3253.362 kb on - strand, within HP15_3097at 3253.395 kb on - strand, within HP15_3097at 3253.401 kb on - strand, within HP15_3097at 3253.441 kb on + strand, within HP15_3097at 3253.493 kb on - strand, within HP15_3097

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride as (N)
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3,251,382 + HP15_3095 0.25 +1.8
3,251,522 + HP15_3095 0.37 +2.1
3,251,529 - HP15_3095 0.38 +0.1
3,251,564 - HP15_3095 0.41 -0.1
3,251,658 + HP15_3095 0.49 +2.0
3,251,770 - HP15_3095 0.59 +2.2
3,251,858 + HP15_3095 0.66 +2.4
3,251,919 - HP15_3095 0.71 +1.7
3,252,101 - HP15_3095 0.87 +0.2
3,252,103 + HP15_3095 0.87 -0.6
3,252,111 - HP15_3095 0.88 +1.9
3,252,201 + -0.2
3,252,226 + +0.9
3,252,234 - -1.4
3,252,363 + HP15_3096 0.36 -0.6
3,252,373 + HP15_3096 0.39 -0.7
3,252,397 + HP15_3096 0.48 -0.5
3,252,534 + +0.3
3,252,568 + -0.2
3,252,673 + HP15_3097 0.11 -0.1
3,252,687 - HP15_3097 0.12 -0.3
3,252,716 - HP15_3097 0.14 -0.2
3,252,746 - HP15_3097 0.16 +1.7
3,252,792 - HP15_3097 0.20 +0.3
3,252,792 - HP15_3097 0.20 -0.3
3,252,810 - HP15_3097 0.21 +2.2
3,252,812 - HP15_3097 0.21 +2.0
3,252,898 + HP15_3097 0.28 -0.4
3,252,913 - HP15_3097 0.29 +1.0
3,252,953 - HP15_3097 0.32 +1.9
3,253,008 + HP15_3097 0.36 -0.5
3,253,046 + HP15_3097 0.39 +0.1
3,253,069 - HP15_3097 0.41 -0.2
3,253,122 - HP15_3097 0.45 -0.5
3,253,240 + HP15_3097 0.54 +2.5
3,253,285 + HP15_3097 0.58 +1.8
3,253,293 - HP15_3097 0.58 -0.8
3,253,362 - HP15_3097 0.64 -0.4
3,253,395 - HP15_3097 0.66 -0.1
3,253,401 - HP15_3097 0.67 +2.2
3,253,441 + HP15_3097 0.70 -0.4
3,253,493 - HP15_3097 0.74 -0.5

Or see this region's nucleotide sequence