Strain Fitness in Marinobacter adhaerens HP15 around HP15_2515

Experiment: D-Glucosamine Hydrochloride as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2514 and HP15_2515 are separated by 66 nucleotidesHP15_2515 and HP15_2516 are separated by 27 nucleotides HP15_2514: HP15_2514 - lysine 2,3-aminomutase YodO family protein, at 2,653,579 to 2,654,619 _2514 HP15_2515: HP15_2515 - hypothetical protein, at 2,654,686 to 2,654,814 _2515 HP15_2516: HP15_2516 - GTPase - translation elongation factor, at 2,654,842 to 2,656,647 _2516 Position (kb) 2654 2655Strain fitness (log2 ratio) -1 0 1 2at 2653.737 kb on - strand, within HP15_2514at 2653.793 kb on - strand, within HP15_2514at 2654.050 kb on - strand, within HP15_2514at 2654.085 kb on - strand, within HP15_2514at 2654.349 kb on + strand, within HP15_2514at 2654.565 kb on + strandat 2654.570 kb on + strandat 2654.702 kb on - strand, within HP15_2515at 2654.809 kb on - strandat 2654.847 kb on + strandat 2654.869 kb on - strandat 2654.886 kb on - strandat 2654.934 kb on + strandat 2654.969 kb on - strandat 2654.983 kb on - strandat 2655.102 kb on - strand, within HP15_2516at 2655.170 kb on + strand, within HP15_2516at 2655.175 kb on + strand, within HP15_2516at 2655.188 kb on + strand, within HP15_2516at 2655.188 kb on + strand, within HP15_2516at 2655.188 kb on + strand, within HP15_2516at 2655.231 kb on + strand, within HP15_2516at 2655.267 kb on - strand, within HP15_2516at 2655.331 kb on + strand, within HP15_2516at 2655.365 kb on + strand, within HP15_2516at 2655.392 kb on - strand, within HP15_2516at 2655.490 kb on - strand, within HP15_2516at 2655.501 kb on + strand, within HP15_2516at 2655.518 kb on + strand, within HP15_2516at 2655.524 kb on - strand, within HP15_2516at 2655.526 kb on - strand, within HP15_2516at 2655.528 kb on + strand, within HP15_2516at 2655.596 kb on + strand, within HP15_2516at 2655.674 kb on + strand, within HP15_2516at 2655.745 kb on + strand, within HP15_2516

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride as (N)
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2,653,737 - HP15_2514 0.15 -0.2
2,653,793 - HP15_2514 0.21 -1.2
2,654,050 - HP15_2514 0.45 +0.8
2,654,085 - HP15_2514 0.49 -0.2
2,654,349 + HP15_2514 0.74 +2.6
2,654,565 + +1.8
2,654,570 + -0.1
2,654,702 - HP15_2515 0.12 -0.4
2,654,809 - +2.7
2,654,847 + +0.8
2,654,869 - +0.8
2,654,886 - -0.6
2,654,934 + -0.0
2,654,969 - -1.2
2,654,983 - +2.0
2,655,102 - HP15_2516 0.14 +2.2
2,655,170 + HP15_2516 0.18 -0.3
2,655,175 + HP15_2516 0.18 +1.6
2,655,188 + HP15_2516 0.19 +0.3
2,655,188 + HP15_2516 0.19 -1.0
2,655,188 + HP15_2516 0.19 -0.5
2,655,231 + HP15_2516 0.22 -0.1
2,655,267 - HP15_2516 0.24 +0.5
2,655,331 + HP15_2516 0.27 -0.6
2,655,365 + HP15_2516 0.29 +2.1
2,655,392 - HP15_2516 0.30 +2.0
2,655,490 - HP15_2516 0.36 -0.2
2,655,501 + HP15_2516 0.36 -0.5
2,655,518 + HP15_2516 0.37 -0.1
2,655,524 - HP15_2516 0.38 +0.9
2,655,526 - HP15_2516 0.38 -0.0
2,655,528 + HP15_2516 0.38 -0.3
2,655,596 + HP15_2516 0.42 -0.4
2,655,674 + HP15_2516 0.46 -0.2
2,655,745 + HP15_2516 0.50 -1.5

Or see this region's nucleotide sequence