Experiment: D-Glucosamine Hydrochloride as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_191 and HP15_192 are separated by 445 nucleotides HP15_192 and HP15_193 overlap by 4 nucleotides HP15_193 and HP15_194 overlap by 11 nucleotides
HP15_191: HP15_191 - Hg(II)--responsive transcriptional regulator, at 180,614 to 181,048
_191
HP15_192: HP15_192 - Hg(II)-transport protein perimplasmic component, at 181,494 to 181,796
_192
HP15_193: HP15_193 - conserved hypothetical protein, membrane, at 181,793 to 182,053
_193
HP15_194: HP15_194 - mercuric ion reductase, at 182,043 to 183,449
_194
Position (kb) 181
182 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 180.504 kb on - strand at 180.594 kb on - strand at 180.605 kb on + strand at 180.653 kb on + strand at 180.686 kb on - strand, within HP15_191 at 180.716 kb on + strand, within HP15_191 at 180.729 kb on - strand, within HP15_191 at 180.892 kb on - strand, within HP15_191 at 180.916 kb on + strand, within HP15_191 at 181.098 kb on - strand at 181.110 kb on + strand at 181.152 kb on + strand at 181.164 kb on + strand at 181.344 kb on + strand at 181.362 kb on + strand at 181.433 kb on - strand at 181.459 kb on - strand at 181.520 kb on + strand at 181.522 kb on + strand at 181.544 kb on + strand, within HP15_192 at 181.572 kb on + strand, within HP15_192 at 181.584 kb on + strand, within HP15_192 at 181.592 kb on - strand, within HP15_192 at 181.602 kb on + strand, within HP15_192 at 181.634 kb on + strand, within HP15_192 at 181.661 kb on + strand, within HP15_192 at 181.669 kb on - strand, within HP15_192 at 181.669 kb on - strand, within HP15_192 at 181.698 kb on - strand, within HP15_192 at 181.716 kb on - strand, within HP15_192 at 181.716 kb on - strand, within HP15_192 at 181.732 kb on - strand, within HP15_192 at 181.751 kb on + strand, within HP15_192 at 181.790 kb on + strand at 181.826 kb on - strand, within HP15_193 at 181.838 kb on + strand, within HP15_193 at 181.857 kb on + strand, within HP15_193 at 181.857 kb on + strand, within HP15_193 at 181.890 kb on + strand, within HP15_193 at 181.957 kb on - strand, within HP15_193 at 181.959 kb on + strand, within HP15_193 at 181.959 kb on + strand, within HP15_193 at 181.967 kb on - strand, within HP15_193 at 181.975 kb on - strand, within HP15_193 at 182.114 kb on - strand at 182.142 kb on - strand at 182.333 kb on + strand, within HP15_194 at 182.367 kb on + strand, within HP15_194 at 182.382 kb on + strand, within HP15_194 at 182.488 kb on + strand, within HP15_194 at 182.522 kb on + strand, within HP15_194 at 182.530 kb on + strand, within HP15_194 at 182.530 kb on + strand, within HP15_194 at 182.530 kb on + strand, within HP15_194 at 182.538 kb on - strand, within HP15_194 at 182.538 kb on - strand, within HP15_194 at 182.622 kb on + strand, within HP15_194 at 182.676 kb on + strand, within HP15_194 at 182.684 kb on - strand, within HP15_194 at 182.737 kb on + strand, within HP15_194 at 182.745 kb on - strand, within HP15_194 at 182.760 kb on + strand, within HP15_194 at 182.760 kb on - strand, within HP15_194 at 182.760 kb on - strand, within HP15_194
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride as (N) remove 180,504 - -0.6 180,594 - -0.5 180,605 + -0.5 180,653 + -0.2 180,686 - HP15_191 0.17 -0.6 180,716 + HP15_191 0.23 -1.2 180,729 - HP15_191 0.26 +2.2 180,892 - HP15_191 0.64 -1.8 180,916 + HP15_191 0.69 +1.9 181,098 - +1.7 181,110 + -1.1 181,152 + +2.1 181,164 + -0.8 181,344 + +2.5 181,362 + -1.1 181,433 - +1.8 181,459 - -1.1 181,520 + -0.5 181,522 + -0.4 181,544 + HP15_192 0.17 +0.1 181,572 + HP15_192 0.26 -0.1 181,584 + HP15_192 0.30 +2.0 181,592 - HP15_192 0.32 +3.9 181,602 + HP15_192 0.36 +1.9 181,634 + HP15_192 0.46 +2.3 181,661 + HP15_192 0.55 +0.3 181,669 - HP15_192 0.58 -0.5 181,669 - HP15_192 0.58 -0.3 181,698 - HP15_192 0.67 +2.2 181,716 - HP15_192 0.73 -0.1 181,716 - HP15_192 0.73 +2.0 181,732 - HP15_192 0.79 -0.5 181,751 + HP15_192 0.85 +1.8 181,790 + -0.3 181,826 - HP15_193 0.13 -1.1 181,838 + HP15_193 0.17 +0.2 181,857 + HP15_193 0.25 -0.7 181,857 + HP15_193 0.25 -0.6 181,890 + HP15_193 0.37 +2.8 181,957 - HP15_193 0.63 -0.4 181,959 + HP15_193 0.64 +2.0 181,959 + HP15_193 0.64 +0.2 181,967 - HP15_193 0.67 -0.3 181,975 - HP15_193 0.70 -0.2 182,114 - +1.1 182,142 - -0.5 182,333 + HP15_194 0.21 -0.6 182,367 + HP15_194 0.23 -1.2 182,382 + HP15_194 0.24 +1.4 182,488 + HP15_194 0.32 -0.8 182,522 + HP15_194 0.34 +1.2 182,530 + HP15_194 0.35 +0.4 182,530 + HP15_194 0.35 +2.2 182,530 + HP15_194 0.35 +1.9 182,538 - HP15_194 0.35 -0.6 182,538 - HP15_194 0.35 -0.2 182,622 + HP15_194 0.41 -0.5 182,676 + HP15_194 0.45 +2.6 182,684 - HP15_194 0.46 +2.4 182,737 + HP15_194 0.49 +0.4 182,745 - HP15_194 0.50 +2.4 182,760 + HP15_194 0.51 +2.1 182,760 - HP15_194 0.51 -0.1 182,760 - HP15_194 0.51 -0.2
Or see this region's nucleotide sequence