Strain Fitness in Marinobacter adhaerens HP15 around HP15_1374

Experiment: D-Glucosamine Hydrochloride as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1373 and HP15_1374 are separated by 153 nucleotidesHP15_1374 and HP15_1375 are separated by 19 nucleotides HP15_1373: HP15_1373 - acetyltransferase, GNAT family, at 1,447,154 to 1,448,272 _1373 HP15_1374: HP15_1374 - glutathione synthase/ribosomal protein S6 modification enzyme, at 1,448,426 to 1,449,973 _1374 HP15_1375: HP15_1375 - cation diffusion facilitator family transporter, at 1,449,993 to 1,451,151 _1375 Position (kb) 1448 1449 1450Strain fitness (log2 ratio) -1 0 1 2 3at 1447.854 kb on - strand, within HP15_1373at 1447.878 kb on - strand, within HP15_1373at 1447.889 kb on - strand, within HP15_1373at 1447.898 kb on + strand, within HP15_1373at 1448.005 kb on + strand, within HP15_1373at 1448.060 kb on - strand, within HP15_1373at 1448.092 kb on - strand, within HP15_1373at 1448.092 kb on - strand, within HP15_1373at 1448.329 kb on + strandat 1448.361 kb on + strandat 1448.371 kb on - strandat 1448.444 kb on + strandat 1448.569 kb on - strandat 1448.590 kb on + strand, within HP15_1374at 1448.629 kb on + strand, within HP15_1374at 1448.678 kb on + strand, within HP15_1374at 1448.720 kb on + strand, within HP15_1374at 1448.886 kb on + strand, within HP15_1374at 1448.987 kb on + strand, within HP15_1374at 1449.100 kb on + strand, within HP15_1374at 1449.186 kb on - strand, within HP15_1374at 1449.304 kb on + strand, within HP15_1374at 1449.445 kb on + strand, within HP15_1374at 1449.603 kb on - strand, within HP15_1374at 1449.913 kb on + strandat 1449.958 kb on + strandat 1450.011 kb on + strandat 1450.019 kb on - strandat 1450.093 kb on - strandat 1450.114 kb on - strand, within HP15_1375at 1450.197 kb on - strand, within HP15_1375at 1450.199 kb on + strand, within HP15_1375at 1450.266 kb on + strand, within HP15_1375at 1450.279 kb on + strand, within HP15_1375at 1450.284 kb on + strand, within HP15_1375at 1450.482 kb on - strand, within HP15_1375at 1450.532 kb on - strand, within HP15_1375at 1450.574 kb on + strand, within HP15_1375at 1450.579 kb on + strand, within HP15_1375at 1450.778 kb on - strand, within HP15_1375at 1450.780 kb on + strand, within HP15_1375at 1450.827 kb on - strand, within HP15_1375at 1450.852 kb on + strand, within HP15_1375at 1450.860 kb on - strand, within HP15_1375at 1450.937 kb on - strand, within HP15_1375

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride as (N)
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1,447,854 - HP15_1373 0.63 +2.7
1,447,878 - HP15_1373 0.65 -0.8
1,447,889 - HP15_1373 0.66 +0.2
1,447,898 + HP15_1373 0.66 +2.5
1,448,005 + HP15_1373 0.76 -0.9
1,448,060 - HP15_1373 0.81 -0.4
1,448,092 - HP15_1373 0.84 -0.1
1,448,092 - HP15_1373 0.84 +2.0
1,448,329 + +1.9
1,448,361 + -0.5
1,448,371 - +0.1
1,448,444 + -0.3
1,448,569 - -0.5
1,448,590 + HP15_1374 0.11 -0.0
1,448,629 + HP15_1374 0.13 -0.8
1,448,678 + HP15_1374 0.16 +0.1
1,448,720 + HP15_1374 0.19 -0.7
1,448,886 + HP15_1374 0.30 -0.0
1,448,987 + HP15_1374 0.36 -0.7
1,449,100 + HP15_1374 0.44 -0.6
1,449,186 - HP15_1374 0.49 +0.7
1,449,304 + HP15_1374 0.57 -0.7
1,449,445 + HP15_1374 0.66 -1.0
1,449,603 - HP15_1374 0.76 -1.2
1,449,913 + +1.7
1,449,958 + +2.9
1,450,011 + +1.8
1,450,019 - +0.3
1,450,093 - +1.9
1,450,114 - HP15_1375 0.10 +2.1
1,450,197 - HP15_1375 0.18 -0.7
1,450,199 + HP15_1375 0.18 -0.1
1,450,266 + HP15_1375 0.24 +2.2
1,450,279 + HP15_1375 0.25 +2.4
1,450,284 + HP15_1375 0.25 -0.0
1,450,482 - HP15_1375 0.42 +1.9
1,450,532 - HP15_1375 0.47 -0.5
1,450,574 + HP15_1375 0.50 +1.6
1,450,579 + HP15_1375 0.51 -0.3
1,450,778 - HP15_1375 0.68 +2.0
1,450,780 + HP15_1375 0.68 +0.0
1,450,827 - HP15_1375 0.72 -0.0
1,450,852 + HP15_1375 0.74 -0.2
1,450,860 - HP15_1375 0.75 -1.0
1,450,937 - HP15_1375 0.81 -1.3

Or see this region's nucleotide sequence