Experiment: D-Glucosamine Hydrochloride as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1031 and HP15_1032 overlap by 4 nucleotides HP15_1032 and HP15_1033 are separated by 92 nucleotides HP15_1033 and HP15_1034 are separated by 150 nucleotides
HP15_1031: HP15_1031 - UspA domain protein, at 1,049,579 to 1,050,505
_1031
HP15_1032: HP15_1032 - phospholipase, patatin family, at 1,050,502 to 1,051,368
_1032
HP15_1033: HP15_1033 - flavoprotein, NADB Rossmann superfamily, at 1,051,461 to 1,052,642
_1033
HP15_1034: HP15_1034 - Zn-dependent alcohol dehydrogenase, at 1,052,793 to 1,053,851
_1034
Position (kb)
1051
1052
1053 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1050.530 kb on + strand at 1050.530 kb on + strand at 1050.530 kb on + strand at 1050.543 kb on - strand at 1050.683 kb on - strand, within HP15_1032 at 1050.790 kb on - strand, within HP15_1032 at 1050.824 kb on + strand, within HP15_1032 at 1050.883 kb on - strand, within HP15_1032 at 1050.921 kb on - strand, within HP15_1032 at 1050.934 kb on - strand, within HP15_1032 at 1050.966 kb on - strand, within HP15_1032 at 1050.987 kb on + strand, within HP15_1032 at 1051.000 kb on - strand, within HP15_1032 at 1051.039 kb on + strand, within HP15_1032 at 1051.120 kb on - strand, within HP15_1032 at 1051.253 kb on + strand, within HP15_1032 at 1051.261 kb on - strand, within HP15_1032 at 1051.276 kb on + strand, within HP15_1032 at 1051.285 kb on - strand at 1051.392 kb on - strand at 1051.401 kb on + strand at 1051.409 kb on - strand at 1051.420 kb on - strand at 1051.582 kb on + strand, within HP15_1033 at 1051.633 kb on - strand, within HP15_1033 at 1051.680 kb on + strand, within HP15_1033 at 1051.785 kb on + strand, within HP15_1033 at 1051.790 kb on + strand, within HP15_1033 at 1051.793 kb on - strand, within HP15_1033 at 1051.798 kb on - strand, within HP15_1033 at 1051.798 kb on - strand, within HP15_1033 at 1051.887 kb on + strand, within HP15_1033 at 1051.933 kb on + strand, within HP15_1033 at 1052.071 kb on - strand, within HP15_1033 at 1052.077 kb on - strand, within HP15_1033 at 1052.187 kb on + strand, within HP15_1033 at 1052.397 kb on + strand, within HP15_1033 at 1052.410 kb on - strand, within HP15_1033 at 1052.415 kb on - strand, within HP15_1033 at 1052.555 kb on - strand at 1052.584 kb on + strand at 1052.589 kb on + strand at 1052.589 kb on + strand at 1052.589 kb on + strand at 1052.589 kb on + strand at 1052.592 kb on - strand at 1052.597 kb on - strand at 1052.646 kb on - strand at 1052.646 kb on - strand at 1052.646 kb on - strand at 1052.698 kb on + strand at 1052.784 kb on + strand at 1052.861 kb on + strand at 1052.878 kb on - strand at 1053.177 kb on - strand, within HP15_1034 at 1053.354 kb on + strand, within HP15_1034 at 1053.370 kb on + strand, within HP15_1034 at 1053.370 kb on + strand, within HP15_1034 at 1053.448 kb on - strand, within HP15_1034 at 1053.497 kb on - strand, within HP15_1034 at 1053.504 kb on + strand, within HP15_1034 at 1053.531 kb on - strand, within HP15_1034 at 1053.608 kb on + strand, within HP15_1034
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride as (N) remove 1,050,530 + +2.4 1,050,530 + +2.2 1,050,530 + +0.1 1,050,543 - +0.4 1,050,683 - HP15_1032 0.21 -0.3 1,050,790 - HP15_1032 0.33 -0.4 1,050,824 + HP15_1032 0.37 +0.4 1,050,883 - HP15_1032 0.44 +1.3 1,050,921 - HP15_1032 0.48 -0.7 1,050,934 - HP15_1032 0.50 +0.1 1,050,966 - HP15_1032 0.54 -0.9 1,050,987 + HP15_1032 0.56 -1.1 1,051,000 - HP15_1032 0.57 +0.4 1,051,039 + HP15_1032 0.62 -0.6 1,051,120 - HP15_1032 0.71 +2.0 1,051,253 + HP15_1032 0.87 +0.1 1,051,261 - HP15_1032 0.88 -0.0 1,051,276 + HP15_1032 0.89 -0.5 1,051,285 - -0.7 1,051,392 - +1.2 1,051,401 + +1.9 1,051,409 - -0.3 1,051,420 - +2.2 1,051,582 + HP15_1033 0.10 -1.6 1,051,633 - HP15_1033 0.15 -0.3 1,051,680 + HP15_1033 0.19 -0.4 1,051,785 + HP15_1033 0.27 +1.6 1,051,790 + HP15_1033 0.28 -0.8 1,051,793 - HP15_1033 0.28 +0.4 1,051,798 - HP15_1033 0.29 -1.0 1,051,798 - HP15_1033 0.29 -0.4 1,051,887 + HP15_1033 0.36 +0.2 1,051,933 + HP15_1033 0.40 -0.8 1,052,071 - HP15_1033 0.52 -0.8 1,052,077 - HP15_1033 0.52 +1.3 1,052,187 + HP15_1033 0.61 +2.1 1,052,397 + HP15_1033 0.79 -1.2 1,052,410 - HP15_1033 0.80 -0.6 1,052,415 - HP15_1033 0.81 +0.9 1,052,555 - +2.0 1,052,584 + +0.7 1,052,589 + -0.1 1,052,589 + +0.6 1,052,589 + +0.1 1,052,589 + +0.1 1,052,592 - +2.1 1,052,597 - +0.2 1,052,646 - -0.1 1,052,646 - -0.6 1,052,646 - +1.6 1,052,698 + -0.2 1,052,784 + +3.2 1,052,861 + -0.8 1,052,878 - -1.0 1,053,177 - HP15_1034 0.36 -0.3 1,053,354 + HP15_1034 0.53 -0.6 1,053,370 + HP15_1034 0.54 +2.1 1,053,370 + HP15_1034 0.54 -0.8 1,053,448 - HP15_1034 0.62 +2.3 1,053,497 - HP15_1034 0.66 -0.1 1,053,504 + HP15_1034 0.67 -0.2 1,053,531 - HP15_1034 0.70 -0.7 1,053,608 + HP15_1034 0.77 -0.3
Or see this region's nucleotide sequence