Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3035
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,829,740 | + | -0.6 | |||
3,829,878 | + | -0.4 | |||
3,829,900 | + | -0.1 | |||
3,830,122 | + | -0.2 | |||
3,830,159 | + | -0.0 | |||
3,830,319 | - | -1.2 | |||
3,830,339 | - | +0.1 | |||
3,830,480 | - | -0.2 | |||
3,830,493 | + | -0.4 | |||
3,830,530 | - | -0.1 | |||
3,830,769 | + | DvMF_3035 | 0.18 | -1.7 | |
3,830,927 | - | DvMF_3035 | 0.33 | -4.3 | |
3,831,043 | - | DvMF_3035 | 0.45 | -4.2 | |
3,831,227 | + | DvMF_3035 | 0.62 | -3.0 | |
3,831,485 | - | DvMF_3035 | 0.88 | -4.2 | |
3,831,583 | - | -1.0 | |||
3,831,666 | - | +0.3 | |||
3,831,760 | - | -0.8 | |||
3,831,946 | + | -0.3 | |||
3,832,371 | - | -0.6 | |||
3,832,527 | - | DvMF_3036 | 0.10 | -0.2 |
Or see this region's nucleotide sequence