Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1988
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,461,171 | - | DvMF_1987 | 0.69 | -0.1 | |
| 2,461,183 | + | DvMF_1987 | 0.70 | -0.7 | |
| 2,461,191 | - | DvMF_1987 | 0.70 | +0.3 | |
| 2,461,247 | - | DvMF_1987 | 0.72 | -0.1 | |
| 2,461,600 | - | DvMF_1987 | 0.85 | -0.1 | |
| 2,461,733 | + | DvMF_1987 | 0.90 | -0.5 | |
| 2,461,949 | + | +0.1 | |||
| 2,461,962 | - | -0.1 | |||
| 2,462,431 | + | DvMF_1988 | 0.78 | -1.5 | |
| 2,462,439 | - | DvMF_1988 | 0.80 | -1.7 | |
| 2,462,692 | + | -1.2 | |||
| 2,462,757 | - | -0.2 | |||
| 2,462,814 | - | -0.1 | |||
| 2,462,861 | + | -2.0 | |||
| 2,462,868 | - | -2.8 | |||
| 2,463,030 | - | DvMF_1989 | 0.11 | -1.8 | |
| 2,463,030 | - | DvMF_1989 | 0.11 | -2.4 | |
| 2,463,141 | - | DvMF_1989 | 0.17 | -1.8 | |
| 2,463,174 | - | DvMF_1989 | 0.19 | -2.0 | |
| 2,463,267 | + | DvMF_1989 | 0.25 | -1.9 | |
| 2,463,314 | + | DvMF_1989 | 0.28 | -2.0 |
Or see this region's nucleotide sequence