Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1483
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,816,159 | + | DvMF_1482 | 0.20 | -0.5 | |
1,816,318 | - | DvMF_1482 | 0.35 | -0.7 | |
1,816,349 | - | DvMF_1482 | 0.37 | -0.1 | |
1,816,422 | + | DvMF_1482 | 0.44 | -0.4 | |
1,816,482 | + | DvMF_1482 | 0.50 | -0.3 | |
1,816,596 | + | DvMF_1482 | 0.60 | -0.6 | |
1,816,704 | - | DvMF_1482 | 0.70 | -0.0 | |
1,816,798 | + | DvMF_1482 | 0.79 | -0.9 | |
1,816,943 | + | -0.2 | |||
1,817,011 | + | -0.4 | |||
1,817,243 | - | DvMF_1483 | 0.25 | -0.3 | |
1,817,465 | + | DvMF_1483 | 0.50 | -0.4 | |
1,817,535 | + | DvMF_1483 | 0.58 | -0.2 | |
1,817,551 | + | DvMF_1483 | 0.59 | +0.0 | |
1,817,662 | - | DvMF_1483 | 0.72 | -0.0 | |
1,817,838 | - | -0.1 | |||
1,817,848 | - | -0.5 | |||
1,817,878 | - | -0.1 | |||
1,817,953 | + | -0.4 | |||
1,818,139 | + | +0.3 | |||
1,818,185 | - | +0.3 | |||
1,818,228 | - | -0.2 | |||
1,818,511 | - | -0.9 | |||
1,818,530 | + | DvMF_1484 | 0.10 | -0.2 | |
1,818,582 | - | DvMF_1484 | 0.12 | -0.4 | |
1,818,652 | - | DvMF_1484 | 0.15 | -0.6 | |
1,818,822 | - | DvMF_1484 | 0.23 | -0.3 |
Or see this region's nucleotide sequence