Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1095
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,336,922 | + | -0.2 | |||
1,336,944 | + | -0.3 | |||
1,336,952 | - | -0.4 | |||
1,337,336 | - | DvMF_1095 | 0.71 | -0.6 | |
1,337,444 | - | +0.2 | |||
1,337,590 | - | +1.0 | |||
1,337,590 | - | -1.2 | |||
1,337,672 | - | +0.1 | |||
1,337,672 | - | -0.1 | |||
1,337,672 | - | -0.5 | |||
1,337,800 | - | -0.3 | |||
1,337,998 | - | -0.1 | |||
1,338,148 | - | -0.3 | |||
1,338,294 | - | DvMF_1096 | 0.12 | -0.3 | |
1,338,314 | + | DvMF_1096 | 0.13 | -0.7 | |
1,338,341 | + | DvMF_1096 | 0.13 | -0.1 | |
1,338,349 | - | DvMF_1096 | 0.13 | -0.1 |
Or see this region's nucleotide sequence