Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0985
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,194,725 | + | +0.6 | |||
1,194,739 | + | -0.2 | |||
1,194,896 | - | +0.2 | |||
1,195,278 | + | +0.0 | |||
1,195,650 | - | DvMF_0985 | 0.27 | +0.2 | |
1,195,665 | + | DvMF_0985 | 0.28 | +0.5 | |
1,195,666 | + | DvMF_0985 | 0.28 | +0.2 | |
1,195,831 | + | DvMF_0985 | 0.36 | +0.3 | |
1,195,915 | + | DvMF_0985 | 0.40 | +0.0 | |
1,195,931 | - | DvMF_0985 | 0.41 | +0.1 | |
1,195,933 | + | DvMF_0985 | 0.41 | +0.0 | |
1,196,127 | + | DvMF_0985 | 0.50 | +0.1 | |
1,196,150 | + | DvMF_0985 | 0.51 | +0.5 | |
1,196,282 | + | DvMF_0985 | 0.58 | +0.3 | |
1,196,372 | - | DvMF_0985 | 0.62 | +2.1 | |
1,196,491 | - | DvMF_0985 | 0.68 | +0.0 | |
1,196,868 | + | DvMF_0985 | 0.86 | +0.1 | |
1,196,962 | - | +0.1 | |||
1,197,005 | - | -0.3 | |||
1,197,060 | - | -1.0 | |||
1,197,180 | + | -0.3 | |||
1,197,417 | + | -1.0 | |||
1,197,425 | - | -0.4 | |||
1,197,625 | + | DvMF_0986 | 0.15 | -0.7 | |
1,197,813 | - | DvMF_0986 | 0.31 | -0.3 | |
1,197,845 | + | DvMF_0986 | 0.34 | -1.1 | |
1,197,880 | - | DvMF_0986 | 0.37 | -0.5 |
Or see this region's nucleotide sequence