Strain Fitness in Shewanella amazonensis SB2B around Sama_2956

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
3,517,353	+				-0.0
3,517,353	+				+0.1
3,517,353	+				+0.2
3,517,353	+				-0.6
3,517,354	-				+0.3
3,517,354	-				-0.4
3,517,386	-				-0.2
3,517,386	-				+0.7
3,517,468	-				-0.7
3,517,548	+				-0.0
3,517,548	+				-0.3
3,517,548	+				+1.4
3,517,548	+				-2.6
3,517,548	+				-0.6
3,517,549	-				-0.1
3,517,549	-				+0.8
3,517,549	-				-0.2
3,517,549	-				-0.1
3,517,549	-				+1.2
3,517,549	-				+0.8
3,517,578	+				+0.8
3,517,579	-				-0.6
3,517,579	-				-0.9
3,517,579	-				+0.4
3,517,579	-				-1.3
3,517,579	-				+1.4
3,517,579	-				-0.9
3,517,579	-				+0.6
3,517,625	-				-1.2
3,517,625	-				-1.7
3,517,702	-		Sama_2955	0.20	-2.0
3,517,702	-		Sama_2955	0.20	-1.2
3,517,851	+		Sama_2955	0.40	-0.2
3,517,852	-		Sama_2955	0.40	+0.1
3,517,852	-		Sama_2955	0.40	-0.1
3,517,852	-		Sama_2955	0.40	-0.2
3,517,919	-		Sama_2955	0.49	+0.0
3,517,919	-		Sama_2955	0.49	-1.3
3,517,923	+		Sama_2955	0.50	+0.6
3,517,924	-		Sama_2955	0.50	-1.2
3,518,170	+		Sama_2955	0.82	+1.6
3,518,171	-		Sama_2955	0.82	-0.6
3,518,226	+		Sama_2955	0.90	-0.2
3,518,226	+		Sama_2955	0.90	-1.7
3,518,226	+		Sama_2955	0.90	+0.1
3,518,227	-				-1.5
3,518,310	+				+0.3
3,518,375	-				-2.4
3,518,418	+				+0.2
3,518,418	+				-0.4
3,518,418	+				+2.1
3,518,480	-				-0.9
3,518,480	-				+2.2
3,518,566	+				+1.0
3,518,567	-		Sama_2956	0.10	-0.6
3,518,592	+		Sama_2956	0.11	+0.8
3,518,592	+		Sama_2956	0.11	-1.2
3,518,592	+		Sama_2956	0.11	+0.3
3,518,593	-		Sama_2956	0.11	-1.0
3,518,593	-		Sama_2956	0.11	-1.4
3,518,597	+		Sama_2956	0.11	+0.1
3,518,598	-		Sama_2956	0.11	+0.4
3,518,598	-		Sama_2956	0.11	+1.0
3,518,609	+		Sama_2956	0.12	-0.5
3,518,647	+		Sama_2956	0.13	-0.8
3,518,648	-		Sama_2956	0.13	-0.9
3,518,820	-		Sama_2956	0.20	+1.0
3,518,820	-		Sama_2956	0.20	-2.3
3,518,845	-		Sama_2956	0.21	+1.1
3,518,845	-		Sama_2956	0.21	-0.2
3,518,908	+		Sama_2956	0.23	-0.8
3,518,908	+		Sama_2956	0.23	+0.3
3,518,908	+		Sama_2956	0.23	+0.2
3,518,908	+		Sama_2956	0.23	+0.4
3,518,908	+		Sama_2956	0.23	-1.9
3,518,908	+		Sama_2956	0.23	-1.2
3,518,908	+		Sama_2956	0.23	-0.2
3,518,908	+		Sama_2956	0.23	-0.2
3,518,908	+		Sama_2956	0.23	-0.3
3,518,908	+		Sama_2956	0.23	-1.4
3,518,908	+		Sama_2956	0.23	+0.4
3,518,908	+		Sama_2956	0.23	+0.1
3,518,908	+		Sama_2956	0.23	-1.3
3,518,909	-		Sama_2956	0.23	+0.1
3,518,909	-		Sama_2956	0.23	-1.1
3,518,909	-		Sama_2956	0.23	+0.3
3,518,909	-		Sama_2956	0.23	+0.7
3,518,909	-		Sama_2956	0.23	-0.8
3,518,909	-		Sama_2956	0.23	-1.0
3,518,909	-		Sama_2956	0.23	-0.8
3,518,909	-		Sama_2956	0.23	-0.4
3,518,909	-		Sama_2956	0.23	-0.4
3,518,909	-		Sama_2956	0.23	-0.0
3,518,909	-		Sama_2956	0.23	-1.5
3,518,909	-		Sama_2956	0.23	-0.2
3,518,909	-		Sama_2956	0.23	+1.1
3,518,909	-		Sama_2956	0.23	+0.3
3,518,909	-		Sama_2956	0.23	-0.6
3,518,909	-		Sama_2956	0.23	-0.3
3,518,910	+		Sama_2956	0.23	-2.9
3,518,910	+		Sama_2956	0.23	-0.7
3,518,910	+		Sama_2956	0.23	+0.4
3,518,910	+		Sama_2956	0.23	-1.9
3,518,911	-		Sama_2956	0.23	-0.5
3,518,911	-		Sama_2956	0.23	-0.0
3,518,911	-		Sama_2956	0.23	+0.2
3,518,911	-		Sama_2956	0.23	+0.3
3,518,911	-		Sama_2956	0.23	+0.2
3,519,012	+		Sama_2956	0.27	-0.9
3,519,013	-		Sama_2956	0.27	-0.0
3,519,032	+		Sama_2956	0.28	-0.2
3,519,032	+		Sama_2956	0.28	+1.4
3,519,033	-		Sama_2956	0.28	-0.7
3,519,033	-		Sama_2956	0.28	-0.6
3,519,033	-		Sama_2956	0.28	-0.3
3,519,082	-		Sama_2956	0.30	+0.7
3,519,122	+		Sama_2956	0.31	-0.6
3,519,122	+		Sama_2956	0.31	-1.6
3,519,122	+		Sama_2956	0.31	-1.4
3,519,122	+		Sama_2956	0.31	-2.8
3,519,123	-		Sama_2956	0.31	+1.2
3,519,123	-		Sama_2956	0.31	-0.6
3,519,123	-		Sama_2956	0.31	-1.7
3,519,123	-		Sama_2956	0.31	-0.4
3,519,123	-		Sama_2956	0.31	+0.4
3,519,123	-		Sama_2956	0.31	-0.4
3,519,123	-		Sama_2956	0.31	-0.2
3,519,123	-		Sama_2956	0.31	-0.4
3,519,164	+		Sama_2956	0.33	+0.2
3,519,164	+		Sama_2956	0.33	-0.2
3,519,164	+		Sama_2956	0.33	-1.3
3,519,164	+		Sama_2956	0.33	+0.9
3,519,164	+		Sama_2956	0.33	-1.7
3,519,165	-		Sama_2956	0.33	+1.4
3,519,165	-		Sama_2956	0.33	-0.3
3,519,169	-		Sama_2956	0.33	-0.3
3,519,169	-		Sama_2956	0.33	-0.2
3,519,175	+		Sama_2956	0.33	+0.3
3,519,175	+		Sama_2956	0.33	-0.6
3,519,175	+		Sama_2956	0.33	-0.3
3,519,175	+		Sama_2956	0.33	+1.9
3,519,175	+		Sama_2956	0.33	-0.6
3,519,176	-		Sama_2956	0.33	-2.0
3,519,176	-		Sama_2956	0.33	-0.2
3,519,218	+		Sama_2956	0.35	+0.8
3,519,218	+		Sama_2956	0.35	+0.4
3,519,219	-		Sama_2956	0.35	-0.3
3,519,219	-		Sama_2956	0.35	-0.6
3,519,219	-		Sama_2956	0.35	-0.6
3,519,219	-		Sama_2956	0.35	-1.2
3,519,461	+		Sama_2956	0.44	-0.2
3,519,462	-		Sama_2956	0.44	+2.0
3,519,672	+		Sama_2956	0.52	-0.7
3,519,672	+		Sama_2956	0.52	-0.6
3,519,672	+		Sama_2956	0.52	-0.3
3,519,672	+		Sama_2956	0.52	+1.2
3,519,672	+		Sama_2956	0.52	+0.4
3,519,672	+		Sama_2956	0.52	+0.4
3,519,672	+		Sama_2956	0.52	+0.2
3,519,672	+		Sama_2956	0.52	-0.2
3,519,673	-		Sama_2956	0.52	+0.8
3,519,673	-		Sama_2956	0.52	-0.7
3,519,673	-		Sama_2956	0.52	+0.2
3,519,673	-		Sama_2956	0.52	-1.7
3,519,673	-		Sama_2956	0.52	+0.6
3,519,673	-		Sama_2956	0.52	+1.9
3,519,673	-		Sama_2956	0.52	-2.2
3,519,676	+		Sama_2956	0.52	-0.1
3,519,676	+		Sama_2956	0.52	+0.0
3,519,676	+		Sama_2956	0.52	-0.4
3,519,676	+		Sama_2956	0.52	+0.9
3,519,676	+		Sama_2956	0.52	-0.4
3,519,676	+		Sama_2956	0.52	-0.3
3,519,676	+		Sama_2956	0.52	-0.6
3,519,676	+		Sama_2956	0.52	-1.1
3,519,676	+		Sama_2956	0.52	-1.4
3,519,676	+		Sama_2956	0.52	+0.4
3,519,676	+		Sama_2956	0.52	-0.5
3,519,676	+		Sama_2956	0.52	-0.4
3,519,676	+		Sama_2956	0.52	-2.0
3,519,676	+		Sama_2956	0.52	-1.6
3,519,676	+		Sama_2956	0.52	-1.2
3,519,676	+		Sama_2956	0.52	-0.9
3,519,676	+		Sama_2956	0.52	+0.9
3,519,676	+		Sama_2956	0.52	-0.3
3,519,676	+		Sama_2956	0.52	-0.5
3,519,676	+		Sama_2956	0.52	-1.4
3,519,676	+		Sama_2956	0.52	-0.7
3,519,676	+		Sama_2956	0.52	-0.6
3,519,676	+		Sama_2956	0.52	+0.7
3,519,676	+		Sama_2956	0.52	-0.0
3,519,676	+		Sama_2956	0.52	-1.2
3,519,676	+		Sama_2956	0.52	-1.1
3,519,676	+		Sama_2956	0.52	-1.0
3,519,676	+		Sama_2956	0.52	-0.7
3,519,677	-		Sama_2956	0.52	+1.7
3,519,677	-		Sama_2956	0.52	+0.0
3,519,677	-		Sama_2956	0.52	-0.5
3,519,677	-		Sama_2956	0.52	-0.3
3,519,677	-		Sama_2956	0.52	-1.5
3,519,677	-		Sama_2956	0.52	-0.4
3,519,677	-		Sama_2956	0.52	+1.1
3,519,677	-		Sama_2956	0.52	-1.1
3,519,677	-		Sama_2956	0.52	+1.2
3,519,677	-		Sama_2956	0.52	-0.3
3,519,677	-		Sama_2956	0.52	+1.4
3,519,677	-		Sama_2956	0.52	+0.3
3,519,677	-		Sama_2956	0.52	-1.2
3,519,677	-		Sama_2956	0.52	-0.3
3,519,677	-		Sama_2956	0.52	-0.3
3,519,677	-		Sama_2956	0.52	+0.4
3,519,677	-		Sama_2956	0.52	+0.1
3,519,677	-		Sama_2956	0.52	-2.3
3,519,679	-		Sama_2956	0.52	+0.4
3,519,679	-		Sama_2956	0.52	-1.3
3,519,796	+		Sama_2956	0.57	+1.4
3,519,796	+		Sama_2956	0.57	+1.1
3,519,877	-		Sama_2956	0.60	-1.3
3,519,951	+		Sama_2956	0.63	-0.4
3,519,955	+		Sama_2956	0.63	-1.5
3,519,955	+		Sama_2956	0.63	-0.3
3,519,955	+		Sama_2956	0.63	+0.1
3,519,955	+		Sama_2956	0.63	+0.3
3,519,956	-		Sama_2956	0.63	-0.7
3,519,956	-		Sama_2956	0.63	+1.8
3,519,956	-		Sama_2956	0.63	-0.4
3,519,956	-		Sama_2956	0.63	+0.8
3,519,959	+		Sama_2956	0.63	-0.8
3,519,960	-		Sama_2956	0.63	+0.5
3,520,030	+		Sama_2956	0.66	+0.4
3,520,040	-		Sama_2956	0.66	+0.4
3,520,071	+		Sama_2956	0.67	-0.3
3,520,072	-		Sama_2956	0.67	-0.3
3,520,072	-		Sama_2956	0.67	-0.4
3,520,072	-		Sama_2956	0.67	-2.3
3,520,075	-		Sama_2956	0.68	+0.5
3,520,075	-		Sama_2956	0.68	+0.4
3,520,075	-		Sama_2956	0.68	-0.2
3,520,075	-		Sama_2956	0.68	-0.7
3,520,108	-		Sama_2956	0.69	+0.0
3,520,136	+		Sama_2956	0.70	-0.2
3,520,137	-		Sama_2956	0.70	-1.3
3,520,137	-		Sama_2956	0.70	+0.3
3,520,142	+		Sama_2956	0.70	-0.1
3,520,142	+		Sama_2956	0.70	-0.5
3,520,224	+		Sama_2956	0.73	-2.0
3,520,224	+		Sama_2956	0.73	+0.1
3,520,224	+		Sama_2956	0.73	+0.4
3,520,308	+		Sama_2956	0.76	+0.3
3,520,308	+		Sama_2956	0.76	-1.2
3,520,309	-		Sama_2956	0.77	-0.2
3,520,309	-		Sama_2956	0.77	-2.0
3,520,309	-		Sama_2956	0.77	+0.8
3,520,330	-		Sama_2956	0.77	-0.1
3,520,430	+		Sama_2956	0.81	+0.1
3,520,464	-		Sama_2956	0.82	+0.6
3,520,464	-		Sama_2956	0.82	-1.8
3,520,661	+		Sama_2956	0.90	-2.3
3,520,730	+				+0.4
3,520,823	+				-0.2
3,520,823	+				+1.4
3,520,824	-				-1.6
3,520,924	+				-1.5
3,520,925	-				-0.5
3,520,933	-				-0.4
3,520,933	-				+1.9
3,520,933	-				+0.6
3,520,939	+				+0.4
3,520,940	-				+1.4
3,520,981	+				-0.7
3,520,981	+				+1.0
3,520,981	+				-2.5
3,520,981	+				-0.8
3,520,981	+				-0.7
3,520,982	-				-0.2
3,520,982	-				-0.4
3,521,068	+		Sama_2957	0.12	+0.5
3,521,137	+		Sama_2957	0.18	-0.4
3,521,137	+		Sama_2957	0.18	+0.7
3,521,138	-		Sama_2957	0.18	-0.3
3,521,159	+		Sama_2957	0.19	+0.1
3,521,159	+		Sama_2957	0.19	+0.1
3,521,159	+		Sama_2957	0.19	-0.6
3,521,159	+		Sama_2957	0.19	+0.9
3,521,287	-		Sama_2957	0.30	-0.0
3,521,431	+		Sama_2957	0.42	-0.5
3,521,447	+		Sama_2957	0.43	-0.3
3,521,448	-		Sama_2957	0.43	-0.1
3,521,448	-		Sama_2957	0.43	-0.3
3,521,588	+		Sama_2957	0.55	-0.7
3,521,624	+		Sama_2957	0.58	-0.6
3,521,624	+		Sama_2957	0.58	-2.3
3,521,624	+		Sama_2957	0.58	-0.8
3,521,624	+		Sama_2957	0.58	-0.7
3,521,625	-		Sama_2957	0.58	+0.0
3,521,625	-		Sama_2957	0.58	-0.5
3,521,625	-		Sama_2957	0.58	-0.6
3,521,625	-		Sama_2957	0.58	-1.7
3,521,625	-		Sama_2957	0.58	+0.4
3,521,627	+		Sama_2957	0.58	-0.7
3,521,627	+		Sama_2957	0.58	+0.6
3,521,627	+		Sama_2957	0.58	+0.2
3,521,627	+		Sama_2957	0.58	-0.2
3,521,627	+		Sama_2957	0.58	+0.3
3,521,627	+		Sama_2957	0.58	-0.3
3,521,628	-		Sama_2957	0.58	+1.8
3,521,628	-		Sama_2957	0.58	+1.4
3,521,628	-		Sama_2957	0.58	-0.3
3,521,628	-		Sama_2957	0.58	-0.6
3,521,630	+		Sama_2957	0.59	+0.0
3,521,651	-		Sama_2957	0.60	-0.3
3,521,664	+		Sama_2957	0.61	-0.6
3,521,665	-		Sama_2957	0.62	-0.6
3,521,665	-		Sama_2957	0.62	+0.4