Strain Fitness in Marinobacter adhaerens HP15 around HP15_2350

Experiment: NAG as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2348 and HP15_2349 are separated by 260 nucleotidesHP15_2349 and HP15_2350 are separated by 17 nucleotidesHP15_2350 and HP15_2351 are separated by 71 nucleotidesHP15_2351 and HP15_2352 are separated by 284 nucleotides HP15_2348: HP15_2348 - conserved hypothetical protein, at 2,471,648 to 2,472,628 _2348 HP15_2349: HP15_2349 - phosphoribosylaminoimidazole carboxylase catalytic subunit, at 2,472,889 to 2,473,416 _2349 HP15_2350: HP15_2350 - phosphoribosylaminoimidazole carboxylase ATPase subunit, at 2,473,434 to 2,474,552 _2350 HP15_2351: HP15_2351 - superoxide dismutase, Fe, at 2,474,624 to 2,475,202 _2351 HP15_2352: HP15_2352 - sensory box sensor/GGDEF/EAL domain protein, at 2,475,487 to 2,477,547 _2352 Position (kb) 2473 2474 2475Strain fitness (log2 ratio) -1 0 1 2at 2472.599 kb on - strandat 2472.668 kb on + strandat 2472.749 kb on - strandat 2473.394 kb on + strandat 2474.546 kb on + strandat 2474.554 kb on - strandat 2475.244 kb on - strandat 2475.361 kb on + strandat 2475.427 kb on + strandat 2475.440 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG as (N)
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2,472,599 - -0.1
2,472,668 + +1.6
2,472,749 - -0.7
2,473,394 + -0.3
2,474,546 + +2.3
2,474,554 - -0.4
2,475,244 - -1.2
2,475,361 + -0.7
2,475,427 + +1.5
2,475,440 - +1.4

Or see this region's nucleotide sequence