Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3046
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,842,757 | + | DvMF_3045 | 0.11 | -0.4 | |
3,842,791 | + | DvMF_3045 | 0.19 | -0.1 | |
3,842,908 | - | DvMF_3045 | 0.45 | -1.2 | |
3,843,026 | - | DvMF_3045 | 0.71 | -0.9 | |
3,843,186 | - | -0.1 | |||
3,843,186 | - | -0.1 | |||
3,843,298 | - | +0.4 | |||
3,843,365 | + | -0.0 | |||
3,843,380 | + | -1.0 | |||
3,843,380 | + | -0.0 | |||
3,843,395 | + | -0.1 | |||
3,843,398 | - | -0.4 | |||
3,843,423 | - | +0.0 | |||
3,843,623 | + | DvMF_3046 | 0.17 | -3.0 | |
3,843,814 | - | DvMF_3046 | 0.47 | -0.9 | |
3,843,885 | + | DvMF_3046 | 0.58 | -1.4 | |
3,843,927 | + | DvMF_3046 | 0.64 | -2.7 | |
3,844,298 | - | -0.4 | |||
3,844,449 | - | +0.1 | |||
3,844,522 | - | -0.3 | |||
3,844,626 | + | DvMF_3047 | 0.12 | -0.3 | |
3,844,626 | + | DvMF_3047 | 0.12 | +0.4 | |
3,844,764 | - | DvMF_3047 | 0.31 | -0.3 | |
3,844,788 | + | DvMF_3047 | 0.34 | -0.4 | |
3,844,886 | + | DvMF_3047 | 0.47 | +0.4 | |
3,844,903 | + | DvMF_3047 | 0.50 | -0.0 | |
3,845,083 | - | DvMF_3047 | 0.74 | -0.4 |
Or see this region's nucleotide sequence