Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1992
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,468,281 | + | +0.1 | |||
2,468,388 | + | +0.0 | |||
2,468,388 | + | -0.4 | |||
2,468,404 | - | +0.2 | |||
2,468,423 | + | -0.2 | |||
2,468,864 | - | DvMF_1992 | 0.26 | -1.3 | |
2,468,990 | - | DvMF_1992 | 0.38 | -1.8 | |
2,469,056 | - | DvMF_1992 | 0.43 | -1.5 | |
2,469,220 | - | DvMF_1992 | 0.58 | -0.9 | |
2,469,225 | + | DvMF_1992 | 0.59 | -1.6 | |
2,469,306 | - | DvMF_1992 | 0.66 | -2.1 | |
2,469,333 | + | DvMF_1992 | 0.68 | -1.2 | |
2,469,449 | - | DvMF_1992 | 0.79 | -2.4 | |
2,469,521 | - | DvMF_1992 | 0.85 | -2.0 | |
2,469,663 | + | -0.3 | |||
2,470,006 | - | DvMF_1993 | 0.23 | -1.9 | |
2,470,378 | - | DvMF_1993 | 0.48 | -1.6 | |
2,470,380 | + | DvMF_1993 | 0.48 | -1.3 | |
2,470,494 | + | DvMF_1993 | 0.56 | -1.5 |
Or see this region's nucleotide sequence