Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1180
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,457,743 | - | DvMF_1179 | 0.39 | +0.0 | |
1,457,762 | - | DvMF_1179 | 0.41 | -0.4 | |
1,457,799 | - | DvMF_1179 | 0.44 | -0.4 | |
1,457,889 | + | DvMF_1179 | 0.52 | -0.3 | |
1,458,104 | + | DvMF_1179 | 0.71 | -0.8 | |
1,458,265 | + | DvMF_1179 | 0.84 | -0.3 | |
1,458,497 | - | -1.0 | |||
1,458,532 | + | -0.4 | |||
1,458,533 | - | -0.2 | |||
1,458,630 | + | -0.6 | |||
1,458,864 | - | DvMF_1180 | 0.41 | -0.1 | |
1,459,142 | + | -0.5 | |||
1,459,355 | - | +0.1 | |||
1,459,355 | - | -0.3 | |||
1,459,355 | - | -0.5 |
Or see this region's nucleotide sequence