Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0966
Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Chloramphenicol 0.003125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,171,548 | - | DvMF_0965 | 0.48 | -1.0 | |
1,171,712 | + | DvMF_0965 | 0.59 | -2.7 | |
1,172,140 | - | DvMF_0965 | 0.90 | -2.4 | |
1,172,397 | - | -0.3 | |||
1,172,597 | - | DvMF_0966 | 0.18 | +1.2 | |
1,172,608 | - | DvMF_0966 | 0.19 | +0.0 | |
1,172,647 | + | DvMF_0966 | 0.23 | +0.0 | |
1,172,734 | + | DvMF_0966 | 0.31 | +0.3 | |
1,172,742 | - | DvMF_0966 | 0.32 | +0.8 | |
1,172,982 | + | DvMF_0966 | 0.56 | +0.3 | |
1,172,990 | - | DvMF_0966 | 0.56 | +0.3 | |
1,172,990 | - | DvMF_0966 | 0.56 | +0.3 | |
1,173,036 | - | DvMF_0966 | 0.61 | -0.0 | |
1,173,036 | - | DvMF_0966 | 0.61 | -0.5 | |
1,173,053 | + | DvMF_0966 | 0.62 | +1.1 | |
1,173,189 | - | DvMF_0966 | 0.76 | +0.6 | |
1,173,200 | + | DvMF_0966 | 0.77 | +0.4 | |
1,173,358 | - | +0.6 | |||
1,173,591 | + | -0.4 | |||
1,173,637 | + | +0.5 | |||
1,173,640 | - | -0.7 | |||
1,173,792 | - | DvMF_0967 | 0.14 | -0.5 | |
1,174,067 | + | DvMF_0967 | 0.69 | -0.6 |
Or see this region's nucleotide sequence