Experiment: MoYLS4 with Chloramphenicol 0.003125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0495 and DvMF_0496 are separated by 94 nucleotides DvMF_0496 and DvMF_0497 are separated by 8 nucleotides DvMF_0497 and rpsU are separated by 131 nucleotides rpsU and DvMF_0499 are separated by 195 nucleotides
DvMF_0495: DvMF_0495 - DNA primase (RefSeq), at 581,834 to 583,633
_0495
DvMF_0496: DvMF_0496 - Smr protein/MutS2 (RefSeq), at 583,728 to 586,181
_0496
DvMF_0497: DvMF_0497 - GatB/YqeY family protein (RefSeq), at 586,190 to 586,636
_0497
DvMF_0498: rpsU - 30S ribosomal protein S21 (RefSeq), at 586,768 to 586,971
rpsU
DvMF_0499: DvMF_0499 - hypothetical protein (RefSeq), at 587,167 to 587,355
_0499
Position (kb) 583
584
585
586
587 Strain fitness (log2 ratio) -1
0
1 at 583.952 kb on + strand at 583.960 kb on - strand at 584.039 kb on + strand, within DvMF_0496 at 584.170 kb on + strand, within DvMF_0496 at 584.332 kb on + strand, within DvMF_0496 at 584.340 kb on - strand, within DvMF_0496 at 584.403 kb on - strand, within DvMF_0496 at 584.649 kb on - strand, within DvMF_0496 at 584.774 kb on - strand, within DvMF_0496 at 584.779 kb on - strand, within DvMF_0496 at 585.016 kb on - strand, within DvMF_0496 at 585.337 kb on + strand, within DvMF_0496 at 585.423 kb on + strand, within DvMF_0496 at 585.426 kb on - strand, within DvMF_0496 at 585.898 kb on - strand, within DvMF_0496 at 585.911 kb on - strand, within DvMF_0496 at 586.027 kb on + strand at 586.035 kb on - strand at 586.090 kb on - strand at 586.160 kb on + strand at 586.278 kb on - strand, within DvMF_0497 at 586.364 kb on + strand, within DvMF_0497 at 587.057 kb on - strand at 587.178 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chloramphenicol 0.003125 mg/ml remove 583,952 + -0.6 583,960 - -0.4 584,039 + DvMF_0496 0.13 -0.4 584,170 + DvMF_0496 0.18 -0.8 584,332 + DvMF_0496 0.25 -0.6 584,340 - DvMF_0496 0.25 -0.6 584,403 - DvMF_0496 0.28 -0.5 584,649 - DvMF_0496 0.38 -1.3 584,774 - DvMF_0496 0.43 -0.2 584,779 - DvMF_0496 0.43 -1.4 585,016 - DvMF_0496 0.52 +0.4 585,337 + DvMF_0496 0.66 -0.3 585,423 + DvMF_0496 0.69 -0.5 585,426 - DvMF_0496 0.69 -0.6 585,898 - DvMF_0496 0.88 -0.7 585,911 - DvMF_0496 0.89 -0.8 586,027 + -0.6 586,035 - -0.7 586,090 - -0.5 586,160 + +0.1 586,278 - DvMF_0497 0.20 -0.6 586,364 + DvMF_0497 0.39 -0.7 587,057 - -0.7 587,178 - -0.4
Or see this region's nucleotide sequence