Strain Fitness in Shewanella amazonensis SB2B around Sama_3435

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
4,064,988	-		Sama_3434	0.62	+1.4
4,065,006	+		Sama_3434	0.63	-0.1
4,065,006	+		Sama_3434	0.63	+1.9
4,065,007	-		Sama_3434	0.63	+0.5
4,065,079	-		Sama_3434	0.67	-0.9
4,065,159	+		Sama_3434	0.72	+1.2
4,065,159	+		Sama_3434	0.72	+1.1
4,065,159	+		Sama_3434	0.72	+0.7
4,065,160	-		Sama_3434	0.72	-0.1
4,065,160	-		Sama_3434	0.72	+0.7
4,065,160	-		Sama_3434	0.72	-1.0
4,065,160	-		Sama_3434	0.72	-0.8
4,065,160	-		Sama_3434	0.72	-0.0
4,065,166	+		Sama_3434	0.72	-0.2
4,065,167	-		Sama_3434	0.72	+0.5
4,065,201	+		Sama_3434	0.74	+0.7
4,065,201	+		Sama_3434	0.74	-1.5
4,065,201	+		Sama_3434	0.74	-1.1
4,065,201	+		Sama_3434	0.74	-1.9
4,065,202	-		Sama_3434	0.74	+1.1
4,065,264	+		Sama_3434	0.77	+1.1
4,065,337	+		Sama_3434	0.81	-1.0
4,065,338	-		Sama_3434	0.81	-1.0
4,065,338	-		Sama_3434	0.81	+0.2
4,065,414	-		Sama_3434	0.86	-0.8
4,065,534	+				-0.7
4,065,709	+				-0.0
4,065,709	+				-0.6
4,065,709	+				+0.4
4,065,710	-				+0.3
4,065,710	-				-0.5
4,065,710	-				+0.9
4,065,710	-				-0.1
4,065,710	-				+1.7
4,065,711	+				-0.1
4,065,711	+				-0.6
4,065,711	+				-2.2
4,065,711	+				-0.7
4,065,711	+				+0.2
4,065,712	-				-1.4
4,065,712	-				+0.4
4,065,712	-				-0.3
4,065,736	+				+0.4
4,065,736	+				+0.5
4,065,736	+				-0.9
4,065,736	+				-0.6
4,065,737	-				-0.4
4,065,737	-				-0.6
4,065,737	-				-1.2
4,065,737	-				+1.3
4,065,783	+				-0.5
4,065,785	+				-0.1
4,065,785	+				+2.7
4,065,809	+				+1.7
4,065,809	+				-1.7
4,065,809	+				-0.1
4,065,810	-				-0.4
4,065,810	-				-0.6
4,065,810	-				+1.4
4,065,810	-				+0.5
4,065,810	-				-0.6
4,065,815	+				-0.4
4,065,816	-				-1.0
4,065,844	+				+0.2
4,065,844	+				+1.1
4,065,844	+				-2.3
4,065,844	+				+1.1
4,065,844	+				-0.4
4,065,844	+				+0.1
4,065,845	-				+0.5
4,065,864	-				-1.5
4,065,954	+				+0.4
4,065,954	+				+0.0
4,065,955	-				-2.3
4,066,002	+				-1.0
4,066,003	-				-0.8
4,066,013	+				-0.1
4,066,110	+		Sama_3435	0.11	+0.1
4,066,214	+		Sama_3435	0.17	+0.7
4,066,252	-		Sama_3435	0.20	-2.6
4,066,306	+		Sama_3435	0.24	-0.6
4,066,306	+		Sama_3435	0.24	+0.8
4,066,307	-		Sama_3435	0.24	+2.7
4,066,327	-		Sama_3435	0.25	-0.0
4,066,327	-		Sama_3435	0.25	-0.9
4,066,340	+		Sama_3435	0.26	-1.2
4,066,340	+		Sama_3435	0.26	+0.7
4,066,379	+		Sama_3435	0.28	+1.4
4,066,379	+		Sama_3435	0.28	-0.1
4,066,379	+		Sama_3435	0.28	+0.2
4,066,379	+		Sama_3435	0.28	-1.5
4,066,380	-		Sama_3435	0.28	-0.0
4,066,380	-		Sama_3435	0.28	-0.4
4,066,380	-		Sama_3435	0.28	+0.4
4,066,380	-		Sama_3435	0.28	+0.5
4,066,392	+		Sama_3435	0.29	-0.5
4,066,392	+		Sama_3435	0.29	-0.1
4,066,392	+		Sama_3435	0.29	-0.6
4,066,392	+		Sama_3435	0.29	+0.5
4,066,392	+		Sama_3435	0.29	+1.8
4,066,392	+		Sama_3435	0.29	-0.7
4,066,393	-		Sama_3435	0.29	-0.4
4,066,393	-		Sama_3435	0.29	+0.6
4,066,393	-		Sama_3435	0.29	-0.5
4,066,393	-		Sama_3435	0.29	+1.5
4,066,393	-		Sama_3435	0.29	-1.6
4,066,393	-		Sama_3435	0.29	-2.1
4,066,393	-		Sama_3435	0.29	-1.7
4,066,393	-		Sama_3435	0.29	-0.1
4,066,430	+		Sama_3435	0.32	+0.1
4,066,431	-		Sama_3435	0.32	-2.0
4,066,501	+		Sama_3435	0.36	-0.4
4,066,501	+		Sama_3435	0.36	-1.2
4,066,501	+		Sama_3435	0.36	-0.7
4,066,502	-		Sama_3435	0.36	+0.2
4,066,502	-		Sama_3435	0.36	-1.4
4,066,502	-		Sama_3435	0.36	-0.2
4,066,502	-		Sama_3435	0.36	+0.1
4,066,557	-		Sama_3435	0.40	-1.1
4,066,557	-		Sama_3435	0.40	+1.7
4,066,582	+		Sama_3435	0.42	-0.8
4,066,582	+		Sama_3435	0.42	+0.6
4,066,582	+		Sama_3435	0.42	+0.4
4,066,683	-		Sama_3435	0.48	+0.0
4,066,758	+		Sama_3435	0.53	-1.5
4,066,759	-		Sama_3435	0.53	+0.1
4,066,759	-		Sama_3435	0.53	+0.5
4,066,791	+		Sama_3435	0.55	+0.4
4,066,791	+		Sama_3435	0.55	+0.6
4,066,791	+		Sama_3435	0.55	-1.0
4,066,791	+		Sama_3435	0.55	-1.0
4,066,791	+		Sama_3435	0.55	-0.3
4,066,792	-		Sama_3435	0.55	-0.1
4,066,792	-		Sama_3435	0.55	-0.3
4,066,792	-		Sama_3435	0.55	+0.7
4,066,792	-		Sama_3435	0.55	-0.6
4,066,887	+		Sama_3435	0.62	-0.5
4,066,887	+		Sama_3435	0.62	-0.9
4,066,888	-		Sama_3435	0.62	-0.6
4,066,888	-		Sama_3435	0.62	+0.3
4,066,888	-		Sama_3435	0.62	+0.7
4,066,888	-		Sama_3435	0.62	-1.6
4,066,888	-		Sama_3435	0.62	+0.5
4,066,888	-		Sama_3435	0.62	+0.6
4,066,898	+		Sama_3435	0.62	-1.1
4,066,898	+		Sama_3435	0.62	-1.2
4,066,898	+		Sama_3435	0.62	-1.2
4,066,899	-		Sama_3435	0.63	+0.5
4,066,899	-		Sama_3435	0.63	-0.5
4,066,992	+		Sama_3435	0.69	-2.0
4,066,992	+		Sama_3435	0.69	-0.3
4,066,992	+		Sama_3435	0.69	+0.1
4,066,992	+		Sama_3435	0.69	+0.0
4,066,992	+		Sama_3435	0.69	-0.1
4,067,006	-		Sama_3435	0.70	-0.8
4,067,010	+		Sama_3435	0.70	-0.7
4,067,011	-		Sama_3435	0.70	-1.0
4,067,011	-		Sama_3435	0.70	-0.0
4,067,044	+		Sama_3435	0.72	-0.9
4,067,044	+		Sama_3435	0.72	-1.0
4,067,045	-		Sama_3435	0.72	-0.6
4,067,045	-		Sama_3435	0.72	-0.1
4,067,045	-		Sama_3435	0.72	-0.5
4,067,045	-		Sama_3435	0.72	+0.5
4,067,094	+		Sama_3435	0.75	-0.2
4,067,095	-		Sama_3435	0.75	+0.3
4,067,095	-		Sama_3435	0.75	+0.5
4,067,095	-		Sama_3435	0.75	+0.4
4,067,095	-		Sama_3435	0.75	+0.8
4,067,095	-		Sama_3435	0.75	-0.5
4,067,095	-		Sama_3435	0.75	-1.3
4,067,095	-		Sama_3435	0.75	-0.5
4,067,097	+		Sama_3435	0.76	-0.9
4,067,097	+		Sama_3435	0.76	-0.3
4,067,097	+		Sama_3435	0.76	+1.7
4,067,097	+		Sama_3435	0.76	+0.4
4,067,097	+		Sama_3435	0.76	-1.0
4,067,097	+		Sama_3435	0.76	-1.4
4,067,097	+		Sama_3435	0.76	-0.0
4,067,097	+		Sama_3435	0.76	+0.3
4,067,097	+		Sama_3435	0.76	+1.2
4,067,097	+		Sama_3435	0.76	-0.5
4,067,097	+		Sama_3435	0.76	-1.3
4,067,097	+		Sama_3435	0.76	+1.9
4,067,097	+		Sama_3435	0.76	+0.7
4,067,097	+		Sama_3435	0.76	-1.5
4,067,097	+		Sama_3435	0.76	+0.6
4,067,098	-		Sama_3435	0.76	-0.9
4,067,098	-		Sama_3435	0.76	-1.0
4,067,098	-		Sama_3435	0.76	-0.7
4,067,098	-		Sama_3435	0.76	-1.1
4,067,098	-		Sama_3435	0.76	-1.9
4,067,098	-		Sama_3435	0.76	+0.4
4,067,098	-		Sama_3435	0.76	+1.7
4,067,098	-		Sama_3435	0.76	-0.5
4,067,098	-		Sama_3435	0.76	-1.1
4,067,098	-		Sama_3435	0.76	-1.1
4,067,129	+		Sama_3435	0.78	-0.9
4,067,129	+		Sama_3435	0.78	-0.5
4,067,129	+		Sama_3435	0.78	+0.6
4,067,129	+		Sama_3435	0.78	-2.8
4,067,129	+		Sama_3435	0.78	-1.1
4,067,129	+		Sama_3435	0.78	+1.5
4,067,129	+		Sama_3435	0.78	-0.4
4,067,130	-		Sama_3435	0.78	-1.1
4,067,177	+		Sama_3435	0.81	+0.4
4,067,177	+		Sama_3435	0.81	-0.0
4,067,177	+		Sama_3435	0.81	-0.2
4,067,178	-		Sama_3435	0.81	+1.1
4,067,229	+		Sama_3435	0.84	+0.6
4,067,230	-		Sama_3435	0.84	+0.2
4,067,230	-		Sama_3435	0.84	-0.7
4,067,315	+		Sama_3435	0.90	+0.1
4,067,315	+		Sama_3435	0.90	+0.4
4,067,316	-		Sama_3435	0.90	+0.4
4,067,316	-		Sama_3435	0.90	-0.4
4,067,322	+				-0.9
4,067,323	-				+0.4
4,067,358	+				-1.3
4,067,358	+				-0.8
4,067,359	-				+0.4
4,067,360	+				-1.0
4,067,361	-				+0.8
4,067,428	+				+0.2
4,067,429	-				-0.8
4,067,429	-				+0.1
4,067,466	+				-0.4
4,067,466	+				+2.3
4,067,516	-				-0.1
4,067,518	+				+0.5
4,067,519	-				-1.0
4,067,519	-				+0.4
4,067,550	+				-0.2
4,067,562	-				-0.5
4,067,568	-				-0.8
4,067,582	-				-0.1
4,067,586	+				-0.1
4,067,586	+				-1.1
4,067,587	-				-0.0
4,067,595	-				-1.1
4,067,679	+				+1.4
4,067,680	-				-0.5
4,067,715	-				+0.2
4,067,772	+		Sama_3436	0.15	-0.5
4,067,772	+		Sama_3436	0.15	+1.4
4,067,772	+		Sama_3436	0.15	-0.0
4,067,772	+		Sama_3436	0.15	-0.4
4,067,773	-		Sama_3436	0.15	-0.3
4,067,773	-		Sama_3436	0.15	-0.1
4,067,773	-		Sama_3436	0.15	-0.1
4,067,773	-		Sama_3436	0.15	-0.2
4,067,773	-		Sama_3436	0.15	+0.0
4,067,773	-		Sama_3436	0.15	-0.8
4,067,852	+		Sama_3436	0.22	-0.3
4,067,882	+		Sama_3436	0.25	-1.2
4,067,883	-		Sama_3436	0.25	-1.0
4,067,883	-		Sama_3436	0.25	+0.4
4,067,911	+		Sama_3436	0.28	-0.1
4,067,911	+		Sama_3436	0.28	+0.4
4,067,912	-		Sama_3436	0.28	-0.0
4,067,912	-		Sama_3436	0.28	-0.1
4,067,912	-		Sama_3436	0.28	+1.7
4,068,057	-		Sama_3436	0.42	-0.6
4,068,111	+		Sama_3436	0.47	-0.8
4,068,112	-		Sama_3436	0.47	+1.4
4,068,112	-		Sama_3436	0.47	+0.1
4,068,112	-		Sama_3436	0.47	+1.5
4,068,112	-		Sama_3436	0.47	+1.3
4,068,112	-		Sama_3436	0.47	-0.1
4,068,250	+		Sama_3436	0.61	-0.3
4,068,278	+		Sama_3436	0.63	+1.4
4,068,278	+		Sama_3436	0.63	-0.6
4,068,279	-		Sama_3436	0.63	-0.9
4,068,279	-		Sama_3436	0.63	+1.1
4,068,315	+		Sama_3436	0.67	+0.5
4,068,315	+		Sama_3436	0.67	+1.7
4,068,358	+		Sama_3436	0.71	+0.6
4,068,359	-		Sama_3436	0.71	-0.7
4,068,406	+		Sama_3436	0.75	-0.5
4,068,406	+		Sama_3436	0.75	-0.5
4,068,406	+		Sama_3436	0.75	-0.9
4,068,407	-		Sama_3436	0.76	-2.0
4,068,407	-		Sama_3436	0.76	-1.3
4,068,408	+		Sama_3436	0.76	-0.1
4,068,409	-		Sama_3436	0.76	-1.4
4,068,409	-		Sama_3436	0.76	-0.2
4,068,409	-		Sama_3436	0.76	+0.3
4,068,409	-		Sama_3436	0.76	+1.1
4,068,409	-		Sama_3436	0.76	-2.7
4,068,436	+		Sama_3436	0.78	-0.8
4,068,436	+		Sama_3436	0.78	+0.7
4,068,437	-		Sama_3436	0.78	-0.3
4,068,440	+		Sama_3436	0.79	-0.1
4,068,440	+		Sama_3436	0.79	-0.2
4,068,440	+		Sama_3436	0.79	-0.4
4,068,440	+		Sama_3436	0.79	+0.4
4,068,440	+		Sama_3436	0.79	+0.1
4,068,440	+		Sama_3436	0.79	-0.5
4,068,440	+		Sama_3436	0.79	+0.7
4,068,440	+		Sama_3436	0.79	-1.0
4,068,440	+		Sama_3436	0.79	-0.3
4,068,441	-		Sama_3436	0.79	-1.6
4,068,441	-		Sama_3436	0.79	+0.4
4,068,441	-		Sama_3436	0.79	+0.1
4,068,441	-		Sama_3436	0.79	+0.1
4,068,441	-		Sama_3436	0.79	-1.3
4,068,441	-		Sama_3436	0.79	-1.9
4,068,441	-		Sama_3436	0.79	-0.5
4,068,441	-		Sama_3436	0.79	+1.1
4,068,441	-		Sama_3436	0.79	+0.4