Strain Fitness in Shewanella amazonensis SB2B around Sama_0949

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
1,149,366	+		Sama_0948	0.88	-1.9
1,149,366	+		Sama_0948	0.88	+0.5
1,149,366	+		Sama_0948	0.88	-1.9
1,149,367	-		Sama_0948	0.88	-2.1
1,149,367	-		Sama_0948	0.88	+0.7
1,149,367	-		Sama_0948	0.88	-0.7
1,149,469	+				-0.7
1,149,469	+				-1.3
1,149,469	+				+0.1
1,149,469	+				-2.2
1,149,469	+				-1.3
1,149,470	-				-1.6
1,149,470	-				-1.5
1,149,487	+				-1.9
1,149,487	+				+0.7
1,149,487	+				-2.0
1,149,487	+				-2.1
1,149,487	+				-0.5
1,149,488	-				-0.5
1,149,488	-				-1.1
1,149,488	-				-2.0
1,149,504	+				-1.7
1,149,504	+				-1.9
1,149,504	+				+1.0
1,149,504	+				-0.5
1,149,504	+				-1.2
1,149,504	+				-0.3
1,149,505	-				-0.8
1,149,505	-				+0.5
1,149,505	-				-0.5
1,149,505	-				-2.2
1,149,505	-				-1.4
1,149,513	+				-2.4
1,149,513	+				-2.1
1,149,514	-				-0.7
1,149,514	-				-1.2
1,149,514	-				-1.0
1,149,533	+				-0.9
1,149,542	+				+0.4
1,149,543	-				+0.4
1,149,543	-				-0.3
1,149,553	-				-0.0
1,149,563	+				+2.9
1,149,605	+				-0.5
1,149,605	+				+0.9
1,149,605	+				-0.9
1,149,606	-				-1.3
1,149,606	-				-0.0
1,149,628	-				-0.9
1,149,628	-				+0.3
1,149,628	-				+1.3
1,149,861	-				+0.1
1,149,861	-				-0.1
1,149,861	-				+0.7
1,149,861	-				-0.6
1,149,873	-				+0.1
1,149,924	+				-0.6
1,149,925	-				-0.2
1,149,926	+				-1.8
1,149,926	+				-0.7
1,149,926	+				+0.5
1,149,927	-				+0.5
1,149,927	-				-1.2
1,149,927	-				+1.0
1,149,927	-				-0.2
1,149,929	+				-0.0
1,149,929	+				-0.5
1,149,929	+				+0.5
1,149,929	+				-2.2
1,149,930	-				-1.9
1,149,930	-				-0.3
1,149,930	-				-0.2
1,149,930	-				-0.8
1,149,930	-				-1.2
1,149,930	-				-0.9
1,149,930	-				+0.3
1,149,930	-				-1.0
1,149,931	+				-0.7
1,150,018	+				+0.6
1,150,018	+				+1.1
1,150,018	+				-0.7
1,150,019	-				-1.2
1,150,019	-				+0.9
1,150,019	-				-0.0
1,150,019	-				+0.5
1,150,031	-				+0.7
1,150,125	+				+0.6
1,150,126	-				-1.2
1,150,147	-				-0.3
1,150,168	+				-0.3
1,150,169	-				+1.7
1,150,187	+				+0.0
1,150,188	-				-1.6
1,150,208	+				+1.0
1,150,226	+				-0.5
1,150,226	+				+0.4
1,150,226	+				+0.9
1,150,226	+				+0.3
1,150,226	+				-0.5
1,150,226	+				-0.8
1,150,227	-				-0.7
1,150,227	-				-0.0
1,150,337	+		Sama_0949	0.20	-0.1
1,150,337	+		Sama_0949	0.20	-1.0
1,150,338	-		Sama_0949	0.20	-1.2
1,150,338	-		Sama_0949	0.20	+0.7
1,150,338	-		Sama_0949	0.20	+0.1
1,150,338	-		Sama_0949	0.20	-0.9
1,150,338	-		Sama_0949	0.20	-0.0
1,150,341	+		Sama_0949	0.21	-0.8
1,150,341	+		Sama_0949	0.21	-1.0
1,150,341	+		Sama_0949	0.21	+0.1
1,150,341	+		Sama_0949	0.21	+0.0
1,150,341	+		Sama_0949	0.21	-0.5
1,150,342	-		Sama_0949	0.21	-0.9
1,150,345	-		Sama_0949	0.22	-0.4
1,150,356	+		Sama_0949	0.24	+1.1
1,150,356	+		Sama_0949	0.24	+0.7
1,150,399	+		Sama_0949	0.32	-1.3
1,150,400	-		Sama_0949	0.32	-0.3
1,150,400	-		Sama_0949	0.32	-0.2
1,150,400	-		Sama_0949	0.32	-0.7
1,150,400	-		Sama_0949	0.32	-0.1
1,150,409	-		Sama_0949	0.33	-2.2
1,150,414	+		Sama_0949	0.34	-0.4
1,150,492	+		Sama_0949	0.49	-0.2
1,150,492	+		Sama_0949	0.49	-1.2
1,150,510	-		Sama_0949	0.52	-1.0
1,150,510	-		Sama_0949	0.52	-0.3
1,150,534	+		Sama_0949	0.56	-0.9
1,150,534	+		Sama_0949	0.56	+0.1
1,150,534	+		Sama_0949	0.56	+0.3
1,150,535	-		Sama_0949	0.56	-0.0
1,150,535	-		Sama_0949	0.56	-0.2
1,150,535	-		Sama_0949	0.56	-1.8
1,150,535	-		Sama_0949	0.56	-0.2
1,150,542	+		Sama_0949	0.58	-2.3
1,150,546	+		Sama_0949	0.58	-0.9
1,150,546	+		Sama_0949	0.58	+1.0
1,150,547	-		Sama_0949	0.59	-0.3
1,150,666	+		Sama_0949	0.80	+1.3
1,150,667	-		Sama_0949	0.81	+0.3
1,150,667	-		Sama_0949	0.81	+1.0
1,150,669	+		Sama_0949	0.81	-0.3
1,150,669	+		Sama_0949	0.81	-0.0
1,150,670	-		Sama_0949	0.81	-0.2
1,150,718	+				-0.7
1,150,718	+				+0.1
1,150,718	+				-1.4
1,150,718	+				+0.3
1,150,718	+				+0.3
1,150,719	-				+0.7
1,150,719	-				-1.2
1,150,738	+				+0.3
1,150,738	+				-0.7
1,150,739	-				+0.3
1,150,739	-				-0.6
1,150,750	+				-0.8
1,150,750	+				-1.6
1,150,751	-				-0.5
1,150,807	+				+0.9
1,150,807	+				-0.7
1,150,817	-				+0.2
1,150,844	+		Sama_0950	0.12	-0.5
1,150,844	+		Sama_0950	0.12	-1.0
1,150,844	+		Sama_0950	0.12	+0.1
1,150,844	+		Sama_0950	0.12	+0.3
1,150,844	+		Sama_0950	0.12	+0.7
1,150,844	+		Sama_0950	0.12	+0.3
1,150,844	+		Sama_0950	0.12	-0.0
1,150,845	-		Sama_0950	0.12	-1.4
1,150,845	-		Sama_0950	0.12	-0.3
1,150,845	-		Sama_0950	0.12	-0.4
1,150,845	-		Sama_0950	0.12	-0.5
1,150,845	-		Sama_0950	0.12	+0.2
1,150,845	-		Sama_0950	0.12	-0.5
1,150,845	-		Sama_0950	0.12	-1.2
1,150,855	+		Sama_0950	0.14	-0.5
1,150,904	+		Sama_0950	0.23	-0.3
1,150,983	+		Sama_0950	0.36	+0.2
1,150,983	+		Sama_0950	0.36	-0.3
1,150,983	+		Sama_0950	0.36	-2.2
1,150,983	+		Sama_0950	0.36	+0.7
1,150,984	-		Sama_0950	0.36	-1.5
1,150,984	-		Sama_0950	0.36	-1.8
1,150,995	+		Sama_0950	0.38	-1.0
1,150,996	-		Sama_0950	0.39	-0.5
1,150,996	-		Sama_0950	0.39	+0.2
1,151,036	-		Sama_0950	0.46	-0.0
1,151,036	-		Sama_0950	0.46	-0.7
1,151,036	-		Sama_0950	0.46	+1.0
1,151,036	-		Sama_0950	0.46	-0.7
1,151,059	+		Sama_0950	0.50	-0.6
1,151,060	-		Sama_0950	0.50	+0.3
1,151,071	+		Sama_0950	0.52	-0.0
1,151,071	+		Sama_0950	0.52	+0.3
1,151,072	-		Sama_0950	0.52	+0.3
1,151,075	+		Sama_0950	0.52	+0.1
1,151,075	+		Sama_0950	0.52	-1.2
1,151,075	+		Sama_0950	0.52	+0.4
1,151,076	-		Sama_0950	0.53	-2.9
1,151,076	-		Sama_0950	0.53	+2.3
1,151,076	-		Sama_0950	0.53	-1.3
1,151,098	+		Sama_0950	0.56	-0.6
1,151,099	-		Sama_0950	0.57	-1.3
1,151,099	-		Sama_0950	0.57	-0.5
1,151,144	-		Sama_0950	0.64	+0.1
1,151,144	-		Sama_0950	0.64	-0.6
1,151,150	-		Sama_0950	0.65	-0.9
1,151,150	-		Sama_0950	0.65	+0.2
1,151,176	-		Sama_0950	0.70	+0.3
1,151,181	+		Sama_0950	0.71	+0.3
1,151,181	+		Sama_0950	0.71	-0.3
1,151,181	+		Sama_0950	0.71	-0.4
1,151,181	+		Sama_0950	0.71	-1.1
1,151,181	+		Sama_0950	0.71	+0.3
1,151,181	+		Sama_0950	0.71	+1.0
1,151,181	+		Sama_0950	0.71	+0.7
1,151,181	+		Sama_0950	0.71	+2.3
1,151,181	+		Sama_0950	0.71	-1.9
1,151,182	-		Sama_0950	0.71	-0.3
1,151,182	-		Sama_0950	0.71	-2.5
1,151,182	-		Sama_0950	0.71	+1.1
1,151,182	-		Sama_0950	0.71	-0.0
1,151,248	+		Sama_0950	0.83	-0.4
1,151,270	+		Sama_0950	0.86	+0.2
1,151,271	-		Sama_0950	0.87	+0.5
1,151,271	-		Sama_0950	0.87	-0.9
1,151,271	-		Sama_0950	0.87	-2.0
1,151,282	+		Sama_0950	0.88	-0.6
1,151,282	+		Sama_0950	0.88	-0.7
1,151,282	+		Sama_0950	0.88	-0.3
1,151,283	-		Sama_0950	0.89	+1.0
1,151,283	-		Sama_0950	0.89	-0.6
1,151,302	+				-0.3
1,151,326	-				+1.1
1,151,353	+				-0.2
1,151,353	+				-0.3
1,151,355	+				-0.3
1,151,355	+				-0.9
1,151,355	+				+0.7
1,151,355	+				+1.0
1,151,355	+				-0.7
1,151,355	+				-1.5
1,151,355	+				-2.4
1,151,355	+				+0.3
1,151,355	+				-0.5
1,151,356	-				-1.0
1,151,356	-				+1.3
1,151,356	-				-1.7
1,151,356	-				-1.1
1,151,356	-				+0.5
1,151,356	-				-0.5
1,151,356	-				+2.3
1,151,356	-				+0.7
1,151,356	-				-1.1
1,151,356	-				+0.9
1,151,356	-				-1.0
1,151,356	-				+1.5
1,151,356	-				+0.3
1,151,356	-				-0.2
1,151,356	-				-0.4
1,151,356	-				-0.4
1,151,364	+				+1.5
1,151,365	-				-1.3
1,151,365	-				-1.2
1,151,365	-				-0.1
1,151,429	-				+0.7
1,151,433	+				-0.4
1,151,433	+				+0.3
1,151,434	-				+1.6
1,151,468	+				+0.2
1,151,469	-				+2.3
1,151,469	-				+1.3
1,151,498	+				+0.5
1,151,517	-				-0.5
1,151,522	+				-1.5
1,151,523	-				+2.3
1,151,523	-				+1.9
1,151,658	+		Sama_0951	0.30	-0.4
1,151,658	+		Sama_0951	0.30	-0.8
1,151,708	+		Sama_0951	0.40	-2.4