Strain Fitness in Shewanella amazonensis SB2B around Sama_0947

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
1,145,848	+		Sama_0946	0.23	+0.4
1,145,848	+		Sama_0946	0.23	-1.8
1,145,876	+		Sama_0946	0.25	-0.4
1,145,876	+		Sama_0946	0.25	+0.7
1,145,877	-		Sama_0946	0.26	-0.7
1,145,877	-		Sama_0946	0.26	-0.5
1,145,877	-		Sama_0946	0.26	-0.2
1,146,062	+		Sama_0946	0.42	+0.4
1,146,063	-		Sama_0946	0.42	-1.4
1,146,068	+		Sama_0946	0.42	+1.7
1,146,068	+		Sama_0946	0.42	+0.7
1,146,068	+		Sama_0946	0.42	-0.3
1,146,068	+		Sama_0946	0.42	-0.6
1,146,163	+		Sama_0946	0.51	-1.3
1,146,207	+		Sama_0946	0.55	+1.4
1,146,207	+		Sama_0946	0.55	+1.7
1,146,208	-		Sama_0946	0.55	-0.5
1,146,208	-		Sama_0946	0.55	+0.7
1,146,217	+		Sama_0946	0.56	-0.0
1,146,217	+		Sama_0946	0.56	-0.1
1,146,217	+		Sama_0946	0.56	-0.9
1,146,217	+		Sama_0946	0.56	-1.2
1,146,217	+		Sama_0946	0.56	+0.3
1,146,217	+		Sama_0946	0.56	-0.4
1,146,217	+		Sama_0946	0.56	+0.6
1,146,218	-		Sama_0946	0.56	-0.5
1,146,218	-		Sama_0946	0.56	+0.8
1,146,218	-		Sama_0946	0.56	-0.7
1,146,218	-		Sama_0946	0.56	-1.7
1,146,218	-		Sama_0946	0.56	-0.2
1,146,218	-		Sama_0946	0.56	-2.1
1,146,219	+		Sama_0946	0.56	-0.2
1,146,220	-		Sama_0946	0.56	-0.3
1,146,345	+		Sama_0946	0.67	-0.4
1,146,345	+		Sama_0946	0.67	+0.2
1,146,346	-		Sama_0946	0.67	-0.1
1,146,450	-		Sama_0946	0.76	+0.2
1,146,450	-		Sama_0946	0.76	+0.3
1,146,468	+		Sama_0946	0.78	-0.7
1,146,468	+		Sama_0946	0.78	+1.3
1,146,468	+		Sama_0946	0.78	+0.7
1,146,468	+		Sama_0946	0.78	-0.7
1,146,636	+				-0.5
1,146,636	+				-1.7
1,146,653	+				+1.4
1,146,653	+				+0.1
1,146,654	-				-0.5
1,146,728	+				-0.3
1,146,728	+				+0.2
1,146,728	+				+0.2
1,146,729	-				+0.9
1,146,729	-				-0.5
1,146,729	-				-0.0
1,146,776	+				+7.0
1,146,776	+				+4.9
1,146,782	+				+6.7
1,146,806	+				+7.5
1,146,806	+				+5.0
1,146,807	-				+0.4
1,146,816	-				+1.5
1,146,822	+				+0.5
1,146,823	-				-0.5
1,146,823	-				-0.1
1,146,823	-				-0.9
1,146,855	+				-0.0
1,146,866	+				-0.2
1,146,866	+				+0.3
1,146,930	+				+0.1
1,146,993	+		Sama_0947	0.14	+0.3
1,146,993	+		Sama_0947	0.14	-1.0
1,146,993	+		Sama_0947	0.14	+1.3
1,146,993	+		Sama_0947	0.14	-0.8
1,146,994	-		Sama_0947	0.15	-0.4
1,146,994	-		Sama_0947	0.15	+0.3
1,146,994	-		Sama_0947	0.15	+0.7
1,146,994	-		Sama_0947	0.15	+0.3
1,147,012	-		Sama_0947	0.16	+0.1
1,147,134	-		Sama_0947	0.27	-0.0
1,147,171	+		Sama_0947	0.30	+1.0
1,147,172	-		Sama_0947	0.30	+0.5
1,147,217	+		Sama_0947	0.34	+1.1
1,147,217	+		Sama_0947	0.34	-1.5
1,147,217	+		Sama_0947	0.34	-0.5
1,147,217	+		Sama_0947	0.34	+1.3
1,147,217	+		Sama_0947	0.34	-0.3
1,147,217	+		Sama_0947	0.34	+0.3
1,147,217	+		Sama_0947	0.34	-0.2
1,147,217	+		Sama_0947	0.34	-0.0
1,147,218	-		Sama_0947	0.34	-0.5
1,147,218	-		Sama_0947	0.34	+12.7
1,147,218	-		Sama_0947	0.34	-0.5
1,147,218	-		Sama_0947	0.34	+1.3
1,147,223	-		Sama_0947	0.35	+1.7
1,147,285	-		Sama_0947	0.40	+1.0
1,147,304	+		Sama_0947	0.42	+2.0
1,147,416	-		Sama_0947	0.52	+0.1
1,147,416	-		Sama_0947	0.52	-0.0
1,147,444	+		Sama_0947	0.54	+0.3
1,147,444	+		Sama_0947	0.54	+2.3
1,147,444	+		Sama_0947	0.54	+1.5
1,147,444	+		Sama_0947	0.54	-0.3
1,147,444	+		Sama_0947	0.54	+1.0
1,147,444	+		Sama_0947	0.54	+0.7
1,147,444	+		Sama_0947	0.54	+1.7
1,147,444	+		Sama_0947	0.54	-1.4
1,147,445	-		Sama_0947	0.54	+0.7
1,147,445	-		Sama_0947	0.54	-1.6
1,147,445	-		Sama_0947	0.54	-0.7
1,147,445	-		Sama_0947	0.54	+0.3
1,147,445	-		Sama_0947	0.54	+2.3
1,147,445	-		Sama_0947	0.54	-0.9
1,147,445	-		Sama_0947	0.54	-1.1
1,147,459	+		Sama_0947	0.55	+0.7
1,147,460	-		Sama_0947	0.55	-0.8
1,147,473	+		Sama_0947	0.57	+1.3
1,147,473	+		Sama_0947	0.57	+1.9
1,147,473	+		Sama_0947	0.57	+1.6
1,147,473	+		Sama_0947	0.57	+2.0
1,147,496	+		Sama_0947	0.59	+2.0
1,147,497	-		Sama_0947	0.59	+1.3
1,147,533	+		Sama_0947	0.62	+3.1
1,147,534	-		Sama_0947	0.62	+1.3
1,147,534	-		Sama_0947	0.62	+0.5
1,147,670	+		Sama_0947	0.74	+4.4
1,147,670	+		Sama_0947	0.74	+3.0
1,147,670	+		Sama_0947	0.74	+4.0
1,147,715	-		Sama_0947	0.78	-1.1
1,147,715	-		Sama_0947	0.78	-0.4
1,147,788	+		Sama_0947	0.84	+1.0
1,147,788	+		Sama_0947	0.84	+2.4
1,147,789	-		Sama_0947	0.84	+0.3
1,147,789	-		Sama_0947	0.84	-1.5
1,147,789	-		Sama_0947	0.84	-0.0
1,147,793	-		Sama_0947	0.85	-1.1
1,147,793	-		Sama_0947	0.85	-0.5
1,147,822	+		Sama_0947	0.87	+4.1
1,147,830	+		Sama_0947	0.88	+3.8
1,147,851	+		Sama_0947	0.90	+2.9
1,147,851	+		Sama_0947	0.90	+1.6
1,147,851	+		Sama_0947	0.90	+4.1
1,147,862	+				+5.5
1,147,862	+				+6.4
1,147,862	+				+6.3
1,147,862	+				+7.0
1,147,862	+				+5.3
1,147,862	+				+4.3
1,147,863	-				+7.5
1,147,866	+				+5.7
1,147,866	+				+3.6
1,147,866	+				+6.5
1,147,866	+				+6.4
1,147,866	+				+5.2
1,147,867	-				+0.3
1,147,867	-				-1.5
1,147,867	-				-1.7
1,147,867	-				-0.0
1,147,867	-				-0.9
1,147,910	+				+6.8
1,147,927	+				+8.0
1,147,927	+				+6.9
1,147,936	+				+4.1
1,147,936	+				+5.0
1,147,937	-				+0.3
1,147,937	-				+0.8
1,147,949	+				+7.1
1,147,950	-				-0.5
1,147,950	-				+0.8
1,147,977	+				+8.1
1,147,978	-				-0.0
1,148,016	+				+7.9
1,148,016	+				+8.1
1,148,016	+				+7.8
1,148,017	-				-1.2
1,148,017	-				-0.9
1,148,017	-				+0.1
1,148,017	-				-0.3
1,148,022	+				+9.9
1,148,022	+				+9.0
1,148,022	+				+10.1
1,148,023	-				-0.5
1,148,066	+				+6.0
1,148,066	+				+3.8
1,148,066	+				+6.3
1,148,124	+				+3.8
1,148,124	+				+1.3
1,148,125	-				-1.6
1,148,125	-				+0.3
1,148,126	+				+2.2
1,148,126	+				+3.4
1,148,159	+				+0.5
1,148,174	-				+0.1
1,148,181	+				+1.5
1,148,182	-				+0.7
1,148,199	+				-0.7
1,148,199	+				+0.0
1,148,199	+				-0.2
1,148,199	+				-0.5
1,148,199	+				-0.9
1,148,199	+				-1.6
1,148,200	-				-0.7
1,148,200	-				-0.7
1,148,200	-				-0.4
1,148,249	+				-1.9
1,148,273	+				-1.2
1,148,273	+				+0.3
1,148,273	+				-1.3
1,148,274	-				-0.8
1,148,274	-				-0.7
1,148,274	-				-0.0
1,148,274	-				-0.9
1,148,274	-				+0.4
1,148,338	-		Sama_0948	0.10	-0.9
1,148,338	-		Sama_0948	0.10	-1.9
1,148,338	-		Sama_0948	0.10	-1.3
1,148,386	+		Sama_0948	0.14	-0.7
1,148,386	+		Sama_0948	0.14	+0.3
1,148,386	+		Sama_0948	0.14	-0.5
1,148,386	+		Sama_0948	0.14	+1.0
1,148,386	+		Sama_0948	0.14	-1.2
1,148,386	+		Sama_0948	0.14	+0.3
1,148,387	-		Sama_0948	0.14	+2.3
1,148,390	+		Sama_0948	0.14	-0.3
1,148,390	+		Sama_0948	0.14	+1.3
1,148,390	+		Sama_0948	0.14	-0.9
1,148,390	+		Sama_0948	0.14	-0.7
1,148,390	+		Sama_0948	0.14	-1.6
1,148,390	+		Sama_0948	0.14	-0.9
1,148,391	-		Sama_0948	0.14	-1.6
1,148,391	-		Sama_0948	0.14	+0.7
1,148,395	+		Sama_0948	0.15	-0.0
1,148,395	+		Sama_0948	0.15	+0.7
1,148,396	-		Sama_0948	0.15	-1.2
1,148,396	-		Sama_0948	0.15	-2.3
1,148,396	-		Sama_0948	0.15	-2.6
1,148,396	-		Sama_0948	0.15	-1.9
1,148,402	+		Sama_0948	0.15	-0.4
1,148,402	+		Sama_0948	0.15	-0.9
1,148,415	+		Sama_0948	0.16	-0.5
1,148,415	+		Sama_0948	0.16	-1.2
1,148,415	+		Sama_0948	0.16	+0.7
1,148,415	+		Sama_0948	0.16	-0.0
1,148,415	+		Sama_0948	0.16	-1.0
1,148,415	+		Sama_0948	0.16	+0.7
1,148,415	+		Sama_0948	0.16	-0.5
1,148,415	+		Sama_0948	0.16	-1.3
1,148,416	-		Sama_0948	0.16	-0.6
1,148,430	-		Sama_0948	0.17	-1.9
1,148,430	-		Sama_0948	0.17	-0.0
1,148,448	+		Sama_0948	0.19	-1.2
1,148,448	+		Sama_0948	0.19	-0.7
1,148,499	+		Sama_0948	0.23	-0.7
1,148,513	-		Sama_0948	0.24	-1.5
1,148,513	-		Sama_0948	0.24	+0.7
1,148,550	+		Sama_0948	0.26	-2.9
1,148,596	+		Sama_0948	0.30	-0.2
1,148,596	+		Sama_0948	0.30	-1.7
1,148,596	+		Sama_0948	0.30	-0.5
1,148,597	-		Sama_0948	0.30	-1.5
1,148,597	-		Sama_0948	0.30	-0.9
1,148,597	-		Sama_0948	0.30	-1.7
1,148,607	+		Sama_0948	0.31	-1.8
1,148,656	-		Sama_0948	0.34	-2.4
1,148,675	+		Sama_0948	0.36	-0.5
1,148,676	-		Sama_0948	0.36	-2.2
1,148,676	-		Sama_0948	0.36	+0.3
1,148,676	-		Sama_0948	0.36	+2.3
1,148,809	+		Sama_0948	0.46	-1.5
1,148,809	+		Sama_0948	0.46	-0.7
1,148,809	+		Sama_0948	0.46	-1.6
1,148,809	+		Sama_0948	0.46	-0.4
1,148,809	+		Sama_0948	0.46	-2.4
1,148,809	+		Sama_0948	0.46	-0.7
1,148,809	+		Sama_0948	0.46	-1.7
1,148,809	+		Sama_0948	0.46	-2.0
1,148,809	+		Sama_0948	0.46	+0.8
1,148,809	+		Sama_0948	0.46	-2.3
1,148,809	+		Sama_0948	0.46	-1.6
1,148,809	+		Sama_0948	0.46	+0.1
1,148,809	+		Sama_0948	0.46	-1.4
1,148,809	+		Sama_0948	0.46	-0.7
1,148,810	-		Sama_0948	0.46	-0.5
1,148,810	-		Sama_0948	0.46	+0.7
1,148,810	-		Sama_0948	0.46	-1.2
1,148,810	-		Sama_0948	0.46	-2.0
1,148,810	-		Sama_0948	0.46	-1.9
1,148,810	-		Sama_0948	0.46	-1.5
1,148,810	-		Sama_0948	0.46	-0.9
1,148,810	-		Sama_0948	0.46	-1.5
1,148,810	-		Sama_0948	0.46	+0.3
1,148,810	-		Sama_0948	0.46	-2.1
1,148,810	-		Sama_0948	0.46	-0.0
1,148,811	+		Sama_0948	0.46	-2.7
1,148,811	+		Sama_0948	0.46	-2.1
1,148,811	+		Sama_0948	0.46	-0.3
1,148,811	+		Sama_0948	0.46	-2.1
1,148,811	+		Sama_0948	0.46	-0.7
1,148,811	+		Sama_0948	0.46	-1.5
1,148,811	+		Sama_0948	0.46	-1.5
1,148,811	+		Sama_0948	0.46	+0.7
1,148,811	+		Sama_0948	0.46	-1.0
1,148,811	+		Sama_0948	0.46	-1.9
1,148,811	+		Sama_0948	0.46	-1.0
1,148,811	+		Sama_0948	0.46	-2.6
1,148,811	+		Sama_0948	0.46	-0.5
1,148,811	+		Sama_0948	0.46	-1.2
1,148,811	+		Sama_0948	0.46	-1.7
1,148,811	+		Sama_0948	0.46	+1.3
1,148,811	+		Sama_0948	0.46	-0.6
1,148,812	-		Sama_0948	0.46	-0.4
1,148,812	-		Sama_0948	0.46	-0.5
1,148,812	-		Sama_0948	0.46	-2.3
1,148,812	-		Sama_0948	0.46	+1.7
1,148,812	-		Sama_0948	0.46	-0.3
1,148,812	-		Sama_0948	0.46	-0.0
1,148,812	-		Sama_0948	0.46	-1.4
1,148,812	-		Sama_0948	0.46	-0.9
1,148,812	-		Sama_0948	0.46	+0.3
1,148,812	-		Sama_0948	0.46	-2.1
1,148,812	-		Sama_0948	0.46	-0.5
1,148,812	-		Sama_0948	0.46	+0.3
1,148,812	-		Sama_0948	0.46	-0.9
1,148,812	-		Sama_0948	0.46	-2.2
1,148,812	-		Sama_0948	0.46	-1.0
1,148,812	-		Sama_0948	0.46	-0.6
1,148,815	+		Sama_0948	0.46	-1.7
1,148,815	+		Sama_0948	0.46	+1.3
1,148,815	+		Sama_0948	0.46	-0.9
1,148,815	+		Sama_0948	0.46	+1.3
1,148,815	+		Sama_0948	0.46	-1.4
1,148,815	+		Sama_0948	0.46	-1.3
1,148,815	+		Sama_0948	0.46	-2.0
1,148,815	+		Sama_0948	0.46	-0.9
1,148,815	+		Sama_0948	0.46	+0.2
1,148,815	+		Sama_0948	0.46	-0.3
1,148,815	+		Sama_0948	0.46	+0.7
1,148,816	-		Sama_0948	0.46	+0.3
1,148,816	-		Sama_0948	0.46	-1.3
1,148,816	-		Sama_0948	0.46	-0.9
1,148,816	-		Sama_0948	0.46	-0.8
1,148,816	-		Sama_0948	0.46	-0.0
1,148,816	-		Sama_0948	0.46	-0.9
1,148,816	-		Sama_0948	0.46	+0.7
1,148,816	-		Sama_0948	0.46	-0.0
1,148,816	-		Sama_0948	0.46	-0.7
1,148,816	-		Sama_0948	0.46	-2.5
1,148,816	-		Sama_0948	0.46	-0.3
1,148,816	-		Sama_0948	0.46	+0.3
1,148,816	-		Sama_0948	0.46	-1.3
1,148,816	-		Sama_0948	0.46	-0.0
1,148,868	-		Sama_0948	0.50	-2.2
1,148,954	+		Sama_0948	0.57	-1.4
1,148,954	+		Sama_0948	0.57	-0.8