Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g134

Experiment: casaminos as (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos as (N)
136,679	+		HP15_p187g133	0.49	+2.3
136,679	+		HP15_p187g133	0.49	+0.3
136,687	-		HP15_p187g133	0.50	-0.2
136,687	-		HP15_p187g133	0.50	-0.1
136,687	-		HP15_p187g133	0.50	-0.4
136,687	-		HP15_p187g133	0.50	+0.5
136,714	-		HP15_p187g133	0.51	+2.3
136,721	-		HP15_p187g133	0.52	+1.5
136,721	-		HP15_p187g133	0.52	+0.9
136,775	-		HP15_p187g133	0.55	-0.7
136,794	-		HP15_p187g133	0.56	-0.1
136,794	-		HP15_p187g133	0.56	+0.8
136,799	+		HP15_p187g133	0.57	+0.7
136,874	+		HP15_p187g133	0.61	-1.0
136,889	+		HP15_p187g133	0.62	-0.5
136,889	+		HP15_p187g133	0.62	+0.2
136,894	+		HP15_p187g133	0.62	-0.5
136,897	-		HP15_p187g133	0.63	+2.0
136,902	-		HP15_p187g133	0.63	-0.5
136,912	+		HP15_p187g133	0.64	+0.3
136,912	+		HP15_p187g133	0.64	+0.9
136,920	-		HP15_p187g133	0.64	-0.0
136,924	+		HP15_p187g133	0.64	+1.6
136,924	+		HP15_p187g133	0.64	+0.7
136,924	+		HP15_p187g133	0.64	+1.8
136,924	+		HP15_p187g133	0.64	+1.6
136,924	+		HP15_p187g133	0.64	-0.7
136,924	+		HP15_p187g133	0.64	+1.5
136,924	+		HP15_p187g133	0.64	-0.4
136,924	+		HP15_p187g133	0.64	+2.4
136,924	+		HP15_p187g133	0.64	-0.3
136,924	+		HP15_p187g133	0.64	-1.6
136,924	+		HP15_p187g133	0.64	+1.2
136,924	+		HP15_p187g133	0.64	-1.4
136,932	-		HP15_p187g133	0.65	+0.3
136,932	-		HP15_p187g133	0.65	-0.5
136,932	-		HP15_p187g133	0.65	-0.4
136,932	-		HP15_p187g133	0.65	+0.0
136,932	-		HP15_p187g133	0.65	+0.6
136,932	-		HP15_p187g133	0.65	-2.4
136,932	-		HP15_p187g133	0.65	-0.1
136,932	-		HP15_p187g133	0.65	+1.3
136,932	-		HP15_p187g133	0.65	+0.5
136,932	-		HP15_p187g133	0.65	-0.4
136,932	-		HP15_p187g133	0.65	-1.7
136,932	-		HP15_p187g133	0.65	+2.2
136,932	-		HP15_p187g133	0.65	-0.4
136,932	-		HP15_p187g133	0.65	+2.4
136,932	-		HP15_p187g133	0.65	+0.4
136,934	+		HP15_p187g133	0.65	+1.4
136,934	+		HP15_p187g133	0.65	-0.3
136,939	+		HP15_p187g133	0.65	+2.1
136,942	-		HP15_p187g133	0.65	-1.2
136,944	+		HP15_p187g133	0.66	-0.1
136,962	+		HP15_p187g133	0.67	+1.9
136,964	+		HP15_p187g133	0.67	+0.3
136,972	+		HP15_p187g133	0.67	-0.3
136,980	-		HP15_p187g133	0.68	+2.2
137,020	+		HP15_p187g133	0.70	-0.6
137,096	+		HP15_p187g133	0.75	-0.0
137,160	-		HP15_p187g133	0.79	+0.4
137,168	-		HP15_p187g133	0.79	-0.9
137,236	+		HP15_p187g133	0.84	-1.6
137,242	+		HP15_p187g133	0.84	-1.8
137,283	-		HP15_p187g133	0.87	-0.1
137,285	+		HP15_p187g133	0.87	+1.0
137,288	-		HP15_p187g133	0.87	-1.2
137,289	+		HP15_p187g133	0.87	+0.6
137,293	-		HP15_p187g133	0.87	+2.1
137,293	-		HP15_p187g133	0.87	+1.8
137,297	-		HP15_p187g133	0.87	-0.8
137,316	+		HP15_p187g133	0.89	-0.7
137,319	-		HP15_p187g133	0.89	+0.0
137,324	-		HP15_p187g133	0.89	-0.8
137,324	-		HP15_p187g133	0.89	-2.1
137,329	+		HP15_p187g133	0.89	+2.0
137,331	-		HP15_p187g133	0.90	+1.8
137,359	+				+1.7
137,367	-				+0.3
137,367	-				-0.0
137,367	-				-0.3
137,379	+				+1.7
137,395	+				-0.7
137,395	+				+1.4
137,403	-				-1.0
137,403	-				+0.1
137,443	+				-0.5
137,447	+				+0.7
137,448	+				+1.6
137,448	+				+0.9
137,448	+				-0.1
137,456	-				+1.7
137,483	+				+0.5
137,483	+				-0.9
137,517	+				-0.4
137,538	+				+3.3
137,599	+				-0.6
137,604	+				+0.5
137,614	+				-0.3
137,614	+				+1.6
137,614	+				+1.4
137,622	-				+0.2
137,622	-				+0.9
137,659	+				+0.1
137,659	+				+1.4
137,677	+				-0.9
137,677	+				+1.1
137,682	+				+2.1
137,682	+				-1.5
137,709	+				-0.6
137,728	+				+1.6
137,728	+				-1.1
137,738	+				-0.1
137,738	+				-0.8
137,747	-				+0.5
137,748	-				+1.3
137,749	+				+0.4
137,752	-				-1.2
137,752	-				+0.2
137,757	+				+2.1
137,757	-				-0.5
137,767	-		HP15_p187g134	0.11	-0.3
137,800	+		HP15_p187g134	0.14	-0.2
137,800	+		HP15_p187g134	0.14	+2.2
137,808	-		HP15_p187g134	0.15	+0.1
137,821	-		HP15_p187g134	0.16	+0.2
137,821	-		HP15_p187g134	0.16	+0.6
137,835	+		HP15_p187g134	0.18	-0.8
137,842	+		HP15_p187g134	0.18	-0.4
137,850	-		HP15_p187g134	0.19	-0.3
137,850	-		HP15_p187g134	0.19	+0.2
137,862	-		HP15_p187g134	0.20	+0.5
137,874	+		HP15_p187g134	0.22	-0.3
137,882	-		HP15_p187g134	0.22	-1.0
137,897	+		HP15_p187g134	0.24	+2.1
137,905	-		HP15_p187g134	0.25	+0.3
137,979	+		HP15_p187g134	0.32	-0.2
137,981	+		HP15_p187g134	0.33	+2.2
137,989	-		HP15_p187g134	0.33	-0.3
137,989	-		HP15_p187g134	0.33	-0.6
137,989	-		HP15_p187g134	0.33	+1.0
137,989	-		HP15_p187g134	0.33	-0.4
137,989	-		HP15_p187g134	0.33	+1.7
138,007	+		HP15_p187g134	0.35	-0.2
138,014	-		HP15_p187g134	0.36	-1.7
138,014	-		HP15_p187g134	0.36	-0.6
138,016	+		HP15_p187g134	0.36	+0.7
138,023	-		HP15_p187g134	0.37	-0.4
138,036	-		HP15_p187g134	0.38	-0.5
138,079	+		HP15_p187g134	0.43	-0.3
138,079	+		HP15_p187g134	0.43	-0.1
138,087	-		HP15_p187g134	0.43	-1.5
138,110	-		HP15_p187g134	0.46	+2.2
138,118	-		HP15_p187g134	0.46	-0.6
138,137	-		HP15_p187g134	0.48	-0.9
138,137	-		HP15_p187g134	0.48	+0.1
138,137	-		HP15_p187g134	0.48	+1.8
138,137	-		HP15_p187g134	0.48	+0.4
138,137	-		HP15_p187g134	0.48	-0.1
138,137	-		HP15_p187g134	0.48	+1.4
138,137	-		HP15_p187g134	0.48	+1.8
138,137	-		HP15_p187g134	0.48	-0.6
138,145	-		HP15_p187g134	0.49	-0.5
138,197	+		HP15_p187g134	0.55	+0.7
138,253	+		HP15_p187g134	0.60	+1.7
138,312	+		HP15_p187g134	0.66	-0.9
138,312	+		HP15_p187g134	0.66	-0.5
138,320	-		HP15_p187g134	0.67	-0.7
138,325	-		HP15_p187g134	0.68	+2.3
138,388	-		HP15_p187g134	0.74	-0.1
138,403	-		HP15_p187g134	0.76	-0.1
138,408	-		HP15_p187g134	0.76	-0.3
138,502	-		HP15_p187g134	0.86	-0.0
138,516	-		HP15_p187g134	0.87	-1.6
138,591	+				-0.6
138,605	+				-0.5
138,621	+				+0.6
138,621	+				+2.0
138,629	-				+1.3
138,629	-				-0.5
138,636	+				-0.4
138,663	+				+0.5
138,726	+				+0.0
138,726	+				-0.4
138,726	+				-0.3
138,740	-				+1.8
138,755	-				-0.9
138,763	+				-0.6
138,781	-				+1.0
138,966	-		HP15_p187g135	0.16	+0.1
138,966	-		HP15_p187g135	0.16	+0.9
139,018	-		HP15_p187g135	0.23	+0.7
139,031	+		HP15_p187g135	0.24	+1.7
139,039	-		HP15_p187g135	0.25	-0.2
139,048	-		HP15_p187g135	0.27	-0.0
139,068	+		HP15_p187g135	0.29	+1.1
139,105	+		HP15_p187g135	0.34	-1.1
139,105	+		HP15_p187g135	0.34	-0.3
139,113	-		HP15_p187g135	0.35	+2.1
139,132	+		HP15_p187g135	0.37	+1.2
139,132	+		HP15_p187g135	0.37	+1.9
139,132	+		HP15_p187g135	0.37	-0.4
139,137	+		HP15_p187g135	0.38	+0.2
139,137	+		HP15_p187g135	0.38	+0.7
139,137	+		HP15_p187g135	0.38	-0.6
139,140	-		HP15_p187g135	0.38	-0.7
139,140	-		HP15_p187g135	0.38	+1.8
139,140	-		HP15_p187g135	0.38	-0.4
139,153	+		HP15_p187g135	0.40	-0.6
139,154	+		HP15_p187g135	0.40	+1.4
139,160	+		HP15_p187g135	0.41	+1.2
139,160	+		HP15_p187g135	0.41	-0.2
139,167	+		HP15_p187g135	0.42	-1.0
139,168	-		HP15_p187g135	0.42	+2.0
139,168	-		HP15_p187g135	0.42	-0.0
139,181	+		HP15_p187g135	0.43	+1.9
139,213	+		HP15_p187g135	0.48	-0.6
139,215	+		HP15_p187g135	0.48	-0.6
139,252	+		HP15_p187g135	0.52	-1.1
139,257	+		HP15_p187g135	0.53	-1.0
139,260	-		HP15_p187g135	0.53	-0.8
139,271	+		HP15_p187g135	0.55	+0.2
139,271	+		HP15_p187g135	0.55	-2.3
139,279	-		HP15_p187g135	0.56	-0.1
139,281	-		HP15_p187g135	0.56	-1.7
139,294	+		HP15_p187g135	0.58	+0.3
139,294	+		HP15_p187g135	0.58	-1.1
139,294	+		HP15_p187g135	0.58	-1.2
139,294	+		HP15_p187g135	0.58	-0.6
139,302	-		HP15_p187g135	0.59	-0.2
139,302	-		HP15_p187g135	0.59	-0.4
139,302	-		HP15_p187g135	0.59	+1.9
139,302	-		HP15_p187g135	0.59	+0.0
139,330	-		HP15_p187g135	0.62	+0.9
139,426	+		HP15_p187g135	0.75	+0.8
139,426	+		HP15_p187g135	0.75	+0.8
139,434	-		HP15_p187g135	0.76	+0.8
139,447	+		HP15_p187g135	0.77	+1.8
139,447	+		HP15_p187g135	0.77	-0.3
139,447	+		HP15_p187g135	0.77	+1.7
139,447	+		HP15_p187g135	0.77	+0.4
139,447	+		HP15_p187g135	0.77	+2.1
139,447	+		HP15_p187g135	0.77	-2.2
139,455	-		HP15_p187g135	0.78	+0.5
139,455	-		HP15_p187g135	0.78	+0.8
139,470	+		HP15_p187g135	0.80	-1.5
139,476	-		HP15_p187g135	0.81	+1.6
139,508	+		HP15_p187g135	0.85	+0.4
139,529	-		HP15_p187g135	0.88	-0.4
139,532	+		HP15_p187g135	0.88	-1.9
139,542	+		HP15_p187g135	0.89	+2.4
139,542	+		HP15_p187g135	0.89	-0.5
139,542	+		HP15_p187g135	0.89	+1.0
139,542	+		HP15_p187g135	0.89	+2.1
139,542	+		HP15_p187g135	0.89	+0.1
139,542	+		HP15_p187g135	0.89	+1.1
139,542	+		HP15_p187g135	0.89	-0.1
139,542	+		HP15_p187g135	0.89	-0.3
139,542	+		HP15_p187g135	0.89	+1.9
139,542	+		HP15_p187g135	0.89	-0.8
139,550	-				+1.9
139,550	-				+0.0
139,550	-				+1.6
139,550	-				+1.8
139,550	-				-0.5
139,550	-				-0.7
139,550	-				+1.8
139,552	+				+0.1
139,553	+				-0.2
139,553	+				+1.0
139,566	-				+1.8
139,587	-				-0.7
139,587	-				-0.7
139,587	-				+1.8
139,621	-				-0.1
139,642	-				+2.1