Strain Fitness in Shewanella amazonensis SB2B around Sama_2965

Experiment: L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine
3,528,220	-		Sama_2964	0.37	-0.9
3,528,220	-		Sama_2964	0.37	-0.1
3,528,224	-		Sama_2964	0.37	-0.3
3,528,224	-		Sama_2964	0.37	-0.1
3,528,224	-		Sama_2964	0.37	+1.1
3,528,224	-		Sama_2964	0.37	-0.6
3,528,224	-		Sama_2964	0.37	+0.7
3,528,256	-		Sama_2964	0.40	+0.1
3,528,256	-		Sama_2964	0.40	-0.0
3,528,265	+		Sama_2964	0.41	-0.5
3,528,265	+		Sama_2964	0.41	+0.3
3,528,265	+		Sama_2964	0.41	-0.9
3,528,265	+		Sama_2964	0.41	-0.9
3,528,266	-		Sama_2964	0.41	+0.1
3,528,266	-		Sama_2964	0.41	+0.3
3,528,266	-		Sama_2964	0.41	-1.2
3,528,266	-		Sama_2964	0.41	-0.3
3,528,266	-		Sama_2964	0.41	+1.0
3,528,284	+		Sama_2964	0.43	-0.5
3,528,284	+		Sama_2964	0.43	+1.1
3,528,284	+		Sama_2964	0.43	-0.5
3,528,284	+		Sama_2964	0.43	-0.9
3,528,284	+		Sama_2964	0.43	-0.7
3,528,284	+		Sama_2964	0.43	+0.4
3,528,284	+		Sama_2964	0.43	-1.5
3,528,284	+		Sama_2964	0.43	-1.4
3,528,284	+		Sama_2964	0.43	-0.3
3,528,284	+		Sama_2964	0.43	+1.1
3,528,284	+		Sama_2964	0.43	-0.9
3,528,285	-		Sama_2964	0.43	-1.1
3,528,285	-		Sama_2964	0.43	+0.8
3,528,285	-		Sama_2964	0.43	+0.0
3,528,285	-		Sama_2964	0.43	+1.6
3,528,285	-		Sama_2964	0.43	+1.6
3,528,285	-		Sama_2964	0.43	+0.4
3,528,285	-		Sama_2964	0.43	-0.5
3,528,294	+		Sama_2964	0.43	-0.1
3,528,294	+		Sama_2964	0.43	-0.9
3,528,294	+		Sama_2964	0.43	-0.2
3,528,400	+		Sama_2964	0.53	-1.6
3,528,400	+		Sama_2964	0.53	+0.3
3,528,400	+		Sama_2964	0.53	-1.7
3,528,400	+		Sama_2964	0.53	-0.3
3,528,401	-		Sama_2964	0.53	-0.8
3,528,484	-		Sama_2964	0.60	+0.5
3,528,503	+		Sama_2964	0.62	+0.4
3,528,504	-		Sama_2964	0.62	+0.9
3,528,504	-		Sama_2964	0.62	+1.9
3,528,622	-		Sama_2964	0.72	-0.6
3,528,622	-		Sama_2964	0.72	-0.3
3,528,698	+		Sama_2964	0.79	-0.6
3,528,698	+		Sama_2964	0.79	+1.2
3,528,699	-		Sama_2964	0.79	-0.3
3,528,706	-		Sama_2964	0.80	-0.7
3,528,713	+		Sama_2964	0.80	+0.3
3,528,713	+		Sama_2964	0.80	+0.5
3,528,713	+		Sama_2964	0.80	-0.0
3,528,713	+		Sama_2964	0.80	+1.3
3,528,713	+		Sama_2964	0.80	-0.5
3,528,714	-		Sama_2964	0.80	+0.7
3,528,714	-		Sama_2964	0.80	+0.8
3,528,714	-		Sama_2964	0.80	-0.5
3,528,714	-		Sama_2964	0.80	-0.4
3,528,759	+		Sama_2964	0.84	-0.8
3,528,846	+				-1.5
3,528,846	+				-0.4
3,528,847	-				+1.0
3,528,849	+				-1.6
3,528,849	+				-0.4
3,528,849	+				-1.3
3,528,849	+				+0.5
3,528,849	+				-0.1
3,528,850	-				+1.1
3,528,850	-				-0.7
3,528,850	-				-1.1
3,528,850	-				+0.3
3,528,850	-				+0.5
3,528,850	-				+0.1
3,528,850	-				+0.4
3,528,850	-				-1.1
3,528,896	-				+1.5
3,528,907	+				+0.3
3,528,907	+				+0.5
3,528,907	+				+1.7
3,528,907	+				-0.1
3,528,907	+				+0.6
3,528,908	-				-1.2
3,528,908	-				-0.5
3,528,930	+				-2.3
3,528,930	+				+0.1
3,528,937	-				+0.1
3,528,955	-				-0.7
3,529,002	-				+0.1
3,529,018	+				+0.6
3,529,018	+				-1.8
3,529,018	+				-0.5
3,529,019	-				-1.4
3,529,019	-				+1.1
3,529,051	-				-0.3
3,529,053	+				+0.5
3,529,053	+				-0.3
3,529,054	-				+0.7
3,529,056	+				+0.3
3,529,057	-				-0.7
3,529,076	-				+0.5
3,529,078	-				+0.2
3,529,102	+				-1.0
3,529,102	+				+0.3
3,529,103	-				-0.8
3,529,106	+				+0.3
3,529,107	-				-0.2
3,529,107	-				-0.1
3,529,145	+				-0.2
3,529,196	+				-0.3
3,529,239	+				-0.9
3,529,240	-				+0.4
3,529,415	+		Sama_2965	0.17	-1.3
3,529,415	+		Sama_2965	0.17	-0.7
3,529,415	+		Sama_2965	0.17	+1.8
3,529,415	+		Sama_2965	0.17	+0.2
3,529,415	+		Sama_2965	0.17	+1.5
3,529,416	-		Sama_2965	0.17	-0.3
3,529,416	-		Sama_2965	0.17	+0.1
3,529,416	-		Sama_2965	0.17	-1.1
3,529,416	-		Sama_2965	0.17	-0.1
3,529,416	-		Sama_2965	0.17	-0.3
3,529,446	+		Sama_2965	0.20	+2.5
3,529,446	+		Sama_2965	0.20	-1.6
3,529,447	-		Sama_2965	0.20	-1.4
3,529,481	-		Sama_2965	0.23	-0.2
3,529,481	-		Sama_2965	0.23	+0.3
3,529,508	+		Sama_2965	0.25	+1.5
3,529,508	+		Sama_2965	0.25	-0.9
3,529,559	+		Sama_2965	0.29	-0.3
3,529,559	+		Sama_2965	0.29	-0.3
3,529,559	+		Sama_2965	0.29	+0.4
3,529,559	+		Sama_2965	0.29	-0.5
3,529,559	+		Sama_2965	0.29	+0.5
3,529,559	+		Sama_2965	0.29	-1.2
3,529,559	+		Sama_2965	0.29	-0.0
3,529,560	-		Sama_2965	0.30	-1.9
3,529,560	-		Sama_2965	0.30	+0.1
3,529,560	-		Sama_2965	0.30	+1.3
3,529,560	-		Sama_2965	0.30	-0.5
3,529,576	-		Sama_2965	0.31	-0.7
3,529,595	-		Sama_2965	0.32	-0.5
3,529,627	+		Sama_2965	0.35	+1.5
3,529,628	-		Sama_2965	0.35	+0.6
3,529,646	+		Sama_2965	0.37	-2.6
3,529,646	+		Sama_2965	0.37	-0.2
3,529,646	+		Sama_2965	0.37	-0.9
3,529,646	+		Sama_2965	0.37	-0.8
3,529,646	+		Sama_2965	0.37	+0.7
3,529,647	-		Sama_2965	0.37	+0.3
3,529,647	-		Sama_2965	0.37	-0.5
3,529,647	-		Sama_2965	0.37	+1.8
3,529,710	+		Sama_2965	0.42	+0.2
3,529,711	-		Sama_2965	0.42	-1.8
3,529,785	+		Sama_2965	0.48	+0.7
3,529,786	-		Sama_2965	0.49	-1.0
3,529,786	-		Sama_2965	0.49	+0.5
3,529,847	-		Sama_2965	0.54	-1.7
3,529,912	+		Sama_2965	0.59	-0.4
3,529,913	-		Sama_2965	0.59	-0.5
3,529,913	-		Sama_2965	0.59	-1.4
3,529,913	-		Sama_2965	0.59	+0.3
3,529,913	-		Sama_2965	0.59	-0.1
3,529,938	+		Sama_2965	0.61	+0.7
3,529,938	+		Sama_2965	0.61	+0.7
3,529,938	+		Sama_2965	0.61	-0.5
3,529,939	-		Sama_2965	0.61	-1.1
3,529,970	+		Sama_2965	0.64	-1.9
3,529,971	-		Sama_2965	0.64	+0.1
3,529,976	+		Sama_2965	0.64	+0.5
3,529,995	+		Sama_2965	0.66	+1.1
3,529,995	+		Sama_2965	0.66	+0.7
3,529,996	-		Sama_2965	0.66	-0.4
3,529,996	-		Sama_2965	0.66	-0.4
3,529,996	-		Sama_2965	0.66	-0.9
3,529,996	-		Sama_2965	0.66	-1.0
3,530,153	-		Sama_2965	0.79	-0.6
3,530,273	+		Sama_2965	0.89	-0.1
3,530,273	+		Sama_2965	0.89	-0.5
3,530,273	+		Sama_2965	0.89	-0.5
3,530,273	+		Sama_2965	0.89	+0.1
3,530,273	+		Sama_2965	0.89	+0.6
3,530,273	+		Sama_2965	0.89	-0.8
3,530,274	-		Sama_2965	0.90	-0.2
3,530,274	-		Sama_2965	0.90	-0.1
3,530,274	-		Sama_2965	0.90	-1.5
3,530,274	-		Sama_2965	0.90	-0.2
3,530,318	+				-1.6
3,530,318	+				-0.9
3,530,318	+				+0.7
3,530,318	+				-1.8
3,530,318	+				-1.7
3,530,318	+				-1.0
3,530,318	+				-0.1
3,530,319	-				+0.2
3,530,319	-				-1.3
3,530,319	-				+0.6
3,530,422	+				-0.6
3,530,423	-				-1.2
3,530,423	-				-1.4
3,530,423	-				-0.9
3,530,498	-				-0.3
3,530,502	+				+0.8
3,530,561	+				-0.4
3,530,561	+				+0.1
3,530,562	-				-0.7
3,530,581	+				-1.7
3,530,581	+				+0.7
3,530,582	-				-0.4
3,530,582	-				-0.9
3,530,582	-				-0.3
3,530,582	-				-1.9
3,530,582	-				+0.1
3,530,622	-				-0.5
3,530,622	-				+1.3
3,530,622	-				-0.7
3,530,622	-				+1.2
3,530,622	-				-0.0
3,530,716	+		Sama_2966	0.13	-0.2
3,530,716	+		Sama_2966	0.13	+0.3
3,530,716	+		Sama_2966	0.13	+1.5
3,530,716	+		Sama_2966	0.13	-0.6
3,530,716	+		Sama_2966	0.13	+1.1
3,530,716	+		Sama_2966	0.13	+0.1
3,530,716	+		Sama_2966	0.13	-0.3
3,530,716	+		Sama_2966	0.13	+3.1
3,530,716	+		Sama_2966	0.13	-0.1
3,530,716	+		Sama_2966	0.13	-1.3
3,530,716	+		Sama_2966	0.13	-0.3
3,530,716	+		Sama_2966	0.13	-1.6
3,530,716	+		Sama_2966	0.13	-0.6
3,530,716	+		Sama_2966	0.13	+0.0
3,530,716	+		Sama_2966	0.13	-2.5
3,530,717	-		Sama_2966	0.13	+0.5
3,530,717	-		Sama_2966	0.13	+0.1
3,530,717	-		Sama_2966	0.13	+0.2
3,530,717	-		Sama_2966	0.13	+0.4
3,530,717	-		Sama_2966	0.13	+1.1
3,530,717	-		Sama_2966	0.13	-0.3
3,530,717	-		Sama_2966	0.13	+0.7
3,530,717	-		Sama_2966	0.13	+0.7
3,530,717	-		Sama_2966	0.13	-0.7
3,530,717	-		Sama_2966	0.13	-1.2
3,530,717	-		Sama_2966	0.13	-0.0
3,530,717	-		Sama_2966	0.13	-0.8
3,530,717	-		Sama_2966	0.13	+0.7
3,530,718	+		Sama_2966	0.13	+1.7
3,530,718	+		Sama_2966	0.13	+1.1
3,530,718	+		Sama_2966	0.13	-0.4
3,530,718	+		Sama_2966	0.13	+2.1
3,530,718	+		Sama_2966	0.13	-0.9
3,530,719	-		Sama_2966	0.13	+1.2
3,530,719	-		Sama_2966	0.13	-0.5
3,530,719	-		Sama_2966	0.13	-0.4
3,530,719	-		Sama_2966	0.13	+0.3
3,530,719	-		Sama_2966	0.13	-1.3
3,530,719	-		Sama_2966	0.13	+1.1
3,530,719	-		Sama_2966	0.13	-0.8
3,530,719	-		Sama_2966	0.13	-0.9
3,530,719	-		Sama_2966	0.13	+1.7
3,530,719	-		Sama_2966	0.13	+0.1
3,530,719	-		Sama_2966	0.13	-0.3
3,530,719	-		Sama_2966	0.13	+0.3
3,530,719	-		Sama_2966	0.13	+2.1
3,530,750	+		Sama_2966	0.16	-0.8
3,530,750	+		Sama_2966	0.16	-0.5
3,530,776	+		Sama_2966	0.18	+0.5
3,530,868	+		Sama_2966	0.26	+0.6
3,530,869	-		Sama_2966	0.26	+0.7
3,531,000	+		Sama_2966	0.37	-0.9
3,531,000	+		Sama_2966	0.37	+0.9
3,531,049	+		Sama_2966	0.41	-0.9
3,531,050	-		Sama_2966	0.41	-0.3
3,531,050	-		Sama_2966	0.41	+0.3
3,531,050	-		Sama_2966	0.41	+0.7
3,531,050	-		Sama_2966	0.41	-1.8
3,531,050	-		Sama_2966	0.41	+1.1
3,531,150	+		Sama_2966	0.50	+1.5
3,531,206	+		Sama_2966	0.55	-1.5
3,531,206	+		Sama_2966	0.55	-0.9
3,531,206	+		Sama_2966	0.55	-0.9
3,531,206	+		Sama_2966	0.55	-0.1
3,531,206	+		Sama_2966	0.55	+0.5
3,531,206	+		Sama_2966	0.55	+0.7
3,531,206	+		Sama_2966	0.55	+0.3
3,531,206	+		Sama_2966	0.55	+2.4
3,531,206	+		Sama_2966	0.55	+0.4
3,531,206	+		Sama_2966	0.55	-0.7
3,531,206	+		Sama_2966	0.55	+0.1
3,531,206	+		Sama_2966	0.55	+0.3
3,531,206	+		Sama_2966	0.55	+2.1
3,531,206	+		Sama_2966	0.55	-0.8
3,531,206	+		Sama_2966	0.55	+1.6
3,531,206	+		Sama_2966	0.55	-0.9
3,531,206	+		Sama_2966	0.55	+0.3
3,531,206	+		Sama_2966	0.55	+0.4
3,531,206	+		Sama_2966	0.55	-0.5
3,531,206	+		Sama_2966	0.55	+0.3
3,531,206	+		Sama_2966	0.55	-0.0
3,531,206	+		Sama_2966	0.55	+0.1
3,531,207	-		Sama_2966	0.55	-0.9
3,531,207	-		Sama_2966	0.55	-0.9
3,531,207	-		Sama_2966	0.55	-0.2
3,531,207	-		Sama_2966	0.55	-0.6
3,531,207	-		Sama_2966	0.55	+0.7
3,531,207	-		Sama_2966	0.55	-1.2
3,531,207	-		Sama_2966	0.55	-1.3
3,531,207	-		Sama_2966	0.55	+0.2
3,531,207	-		Sama_2966	0.55	+0.8
3,531,207	-		Sama_2966	0.55	+0.5
3,531,207	-		Sama_2966	0.55	-0.6
3,531,207	-		Sama_2966	0.55	+0.3
3,531,207	-		Sama_2966	0.55	-0.3
3,531,207	-		Sama_2966	0.55	+0.7
3,531,207	-		Sama_2966	0.55	-1.1
3,531,207	-		Sama_2966	0.55	-1.9
3,531,207	-		Sama_2966	0.55	-0.3
3,531,207	-		Sama_2966	0.55	+1.1
3,531,207	-		Sama_2966	0.55	+1.5
3,531,207	-		Sama_2966	0.55	+0.5
3,531,207	-		Sama_2966	0.55	-0.2
3,531,207	-		Sama_2966	0.55	-0.8
3,531,210	+		Sama_2966	0.55	-0.9
3,531,211	-		Sama_2966	0.55	+0.1
3,531,283	-		Sama_2966	0.61	-0.3
3,531,383	+		Sama_2966	0.69	-0.5
3,531,383	+		Sama_2966	0.69	+0.5
3,531,383	+		Sama_2966	0.69	-0.7
3,531,383	+		Sama_2966	0.69	+0.1
3,531,383	+		Sama_2966	0.69	+1.1
3,531,383	+		Sama_2966	0.69	+0.5
3,531,384	-		Sama_2966	0.70	-0.3
3,531,384	-		Sama_2966	0.70	-0.6
3,531,384	-		Sama_2966	0.70	-0.4
3,531,384	-		Sama_2966	0.70	-0.0
3,531,384	-		Sama_2966	0.70	-0.9