Strain Fitness in Shewanella amazonensis SB2B around Sama_2393

Experiment: L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine
2,872,862	+		Sama_2392	0.40	+1.0
2,872,862	+		Sama_2392	0.40	-0.3
2,872,863	-		Sama_2392	0.40	-0.6
2,872,863	-		Sama_2392	0.40	+0.2
2,872,864	+		Sama_2392	0.40	+1.4
2,872,864	+		Sama_2392	0.40	-1.4
2,872,864	+		Sama_2392	0.40	-1.8
2,872,864	+		Sama_2392	0.40	-0.3
2,872,864	+		Sama_2392	0.40	+0.4
2,872,864	+		Sama_2392	0.40	+0.5
2,872,864	+		Sama_2392	0.40	-0.9
2,872,864	+		Sama_2392	0.40	+0.7
2,872,864	+		Sama_2392	0.40	-1.0
2,872,864	+		Sama_2392	0.40	+0.1
2,872,864	+		Sama_2392	0.40	-1.3
2,872,865	-		Sama_2392	0.40	-0.4
2,872,865	-		Sama_2392	0.40	-0.6
2,872,865	-		Sama_2392	0.40	-0.8
2,872,865	-		Sama_2392	0.40	-0.1
2,872,865	-		Sama_2392	0.40	+1.1
2,872,865	-		Sama_2392	0.40	-2.4
2,872,865	-		Sama_2392	0.40	-1.3
2,872,865	-		Sama_2392	0.40	+0.7
2,872,865	-		Sama_2392	0.40	-0.3
2,872,865	-		Sama_2392	0.40	-0.4
2,872,865	-		Sama_2392	0.40	-0.0
2,872,865	-		Sama_2392	0.40	-0.9
2,872,865	-		Sama_2392	0.40	+0.6
2,872,865	-		Sama_2392	0.40	-0.9
2,872,865	-		Sama_2392	0.40	-1.3
2,872,865	-		Sama_2392	0.40	-0.3
2,872,865	-		Sama_2392	0.40	-0.4
2,872,865	-		Sama_2392	0.40	-0.2
2,872,865	-		Sama_2392	0.40	-0.3
2,872,865	-		Sama_2392	0.40	-0.2
2,872,867	+		Sama_2392	0.40	-2.0
2,872,867	+		Sama_2392	0.40	-0.9
2,872,915	-		Sama_2392	0.44	-0.6
2,872,915	-		Sama_2392	0.44	+1.0
2,872,915	-		Sama_2392	0.44	+1.0
2,872,915	-		Sama_2392	0.44	+0.4
2,872,946	+		Sama_2392	0.46	-0.3
2,872,947	-		Sama_2392	0.46	-1.1
2,872,947	-		Sama_2392	0.46	-1.8
2,872,991	+		Sama_2392	0.49	+1.3
2,872,991	+		Sama_2392	0.49	+0.7
2,873,066	+		Sama_2392	0.54	-1.5
2,873,066	+		Sama_2392	0.54	+0.2
2,873,067	-		Sama_2392	0.54	-0.2
2,873,067	-		Sama_2392	0.54	-1.2
2,873,067	-		Sama_2392	0.54	-1.1
2,873,068	+		Sama_2392	0.54	-0.6
2,873,068	+		Sama_2392	0.54	+0.1
2,873,068	+		Sama_2392	0.54	-0.2
2,873,068	+		Sama_2392	0.54	-0.2
2,873,068	+		Sama_2392	0.54	+0.9
2,873,068	+		Sama_2392	0.54	+0.7
2,873,069	-		Sama_2392	0.54	+2.1
2,873,069	-		Sama_2392	0.54	-0.3
2,873,069	-		Sama_2392	0.54	-0.0
2,873,069	-		Sama_2392	0.54	+0.7
2,873,069	-		Sama_2392	0.54	-1.1
2,873,069	-		Sama_2392	0.54	-1.1
2,873,145	+		Sama_2392	0.60	+0.1
2,873,145	+		Sama_2392	0.60	+0.5
2,873,146	-		Sama_2392	0.60	-0.5
2,873,146	-		Sama_2392	0.60	-0.8
2,873,146	-		Sama_2392	0.60	-1.1
2,873,146	-		Sama_2392	0.60	+0.7
2,873,146	-		Sama_2392	0.60	+1.1
2,873,146	-		Sama_2392	0.60	-2.4
2,873,215	+		Sama_2392	0.64	+2.3
2,873,215	+		Sama_2392	0.64	+0.7
2,873,215	+		Sama_2392	0.64	-2.1
2,873,215	+		Sama_2392	0.64	-2.1
2,873,215	+		Sama_2392	0.64	+0.2
2,873,215	+		Sama_2392	0.64	-0.9
2,873,215	+		Sama_2392	0.64	+1.7
2,873,215	+		Sama_2392	0.64	+1.7
2,873,216	-		Sama_2392	0.64	-1.4
2,873,216	-		Sama_2392	0.64	+1.1
2,873,216	-		Sama_2392	0.64	-1.7
2,873,216	-		Sama_2392	0.64	-1.3
2,873,216	-		Sama_2392	0.64	+0.6
2,873,245	+		Sama_2392	0.66	-1.2
2,873,311	+		Sama_2392	0.71	-0.9
2,873,312	-		Sama_2392	0.71	+0.4
2,873,386	-		Sama_2392	0.76	+1.3
2,873,386	-		Sama_2392	0.76	-0.8
2,873,459	+		Sama_2392	0.81	-1.4
2,873,460	-		Sama_2392	0.81	-1.0
2,873,460	-		Sama_2392	0.81	-1.0
2,873,630	+				+1.7
2,873,631	-				+2.1
2,873,631	-				+0.9
2,873,631	-				-0.2
2,873,732	+				-0.8
2,873,732	+				-0.5
2,873,732	+				+0.1
2,873,732	+				-2.2
2,873,732	+				+0.3
2,873,732	+				+0.1
2,873,732	+				+0.1
2,873,732	+				+3.3
2,873,733	-				-0.2
2,873,733	-				+0.3
2,873,733	-				-0.5
2,873,733	-				-0.1
2,873,733	-				-0.5
2,873,733	-				+0.3
2,873,733	-				-1.5
2,873,733	-				+0.2
2,873,733	-				-0.4
2,873,733	-				-0.9
2,873,733	-				-1.9
2,873,733	-				-0.3
2,873,733	-				-0.0
2,873,733	-				+1.7
2,873,797	+				-1.5
2,873,799	+				-0.3
2,873,848	-				-1.3
2,873,872	-				-1.5
2,873,890	+				-0.6
2,873,897	-				+0.1
2,873,960	-				+0.3
2,874,021	+				-0.9
2,874,021	+				-0.6
2,874,022	-				+0.4
2,874,022	-				+0.1
2,874,022	-				-0.9
2,874,022	-				+0.1
2,874,022	-				-1.0
2,874,022	-				+0.7
2,874,022	-				-0.4
2,874,137	+		Sama_2393	0.14	-2.1
2,874,138	-		Sama_2393	0.14	-0.6
2,874,138	-		Sama_2393	0.14	+0.5
2,874,138	-		Sama_2393	0.14	-0.3
2,874,196	-		Sama_2393	0.16	-0.3
2,874,196	-		Sama_2393	0.16	-2.8
2,874,234	+		Sama_2393	0.17	+0.7
2,874,234	+		Sama_2393	0.17	+0.7
2,874,235	-		Sama_2393	0.17	-0.6
2,874,246	+		Sama_2393	0.18	-0.2
2,874,280	+		Sama_2393	0.19	-2.1
2,874,280	+		Sama_2393	0.19	-0.6
2,874,281	-		Sama_2393	0.19	+0.9
2,874,307	+		Sama_2393	0.20	+0.7
2,874,326	+		Sama_2393	0.21	+0.1
2,874,326	+		Sama_2393	0.21	-0.6
2,874,326	+		Sama_2393	0.21	-0.3
2,874,327	-		Sama_2393	0.21	+0.8
2,874,327	-		Sama_2393	0.21	-0.0
2,874,327	-		Sama_2393	0.21	-1.0
2,874,327	-		Sama_2393	0.21	-0.4
2,874,347	-		Sama_2393	0.22	+0.0
2,874,387	-		Sama_2393	0.23	-0.6
2,874,387	-		Sama_2393	0.23	-0.5
2,874,426	-		Sama_2393	0.25	+0.2
2,874,441	+		Sama_2393	0.25	-0.0
2,874,450	+		Sama_2393	0.26	+0.3
2,874,450	+		Sama_2393	0.26	-0.5
2,874,451	-		Sama_2393	0.26	-1.5
2,874,460	+		Sama_2393	0.26	+2.1
2,874,460	+		Sama_2393	0.26	-0.5
2,874,461	-		Sama_2393	0.26	-0.6
2,874,538	+		Sama_2393	0.29	-1.1
2,874,538	+		Sama_2393	0.29	-2.9
2,874,539	-		Sama_2393	0.29	-1.5
2,874,539	-		Sama_2393	0.29	-0.9
2,874,539	-		Sama_2393	0.29	+1.0
2,874,542	+		Sama_2393	0.29	+0.7
2,874,542	+		Sama_2393	0.29	+0.7
2,874,542	+		Sama_2393	0.29	-0.3
2,874,628	+		Sama_2393	0.32	-1.1
2,874,628	+		Sama_2393	0.32	-1.5
2,874,628	+		Sama_2393	0.32	-0.3
2,874,629	-		Sama_2393	0.33	+0.7
2,874,629	-		Sama_2393	0.33	-0.9
2,874,633	+		Sama_2393	0.33	-1.3
2,874,633	+		Sama_2393	0.33	+1.4
2,874,634	-		Sama_2393	0.33	-0.1
2,874,634	-		Sama_2393	0.33	-0.5
2,874,733	+		Sama_2393	0.37	-0.0
2,874,734	-		Sama_2393	0.37	+0.7
2,874,734	-		Sama_2393	0.37	-1.6
2,874,734	-		Sama_2393	0.37	-1.3
2,874,735	+		Sama_2393	0.37	-0.6
2,874,735	+		Sama_2393	0.37	-0.9
2,874,735	+		Sama_2393	0.37	+0.1
2,874,736	-		Sama_2393	0.37	+0.1
2,874,736	-		Sama_2393	0.37	-0.6
2,874,746	+		Sama_2393	0.37	+0.2
2,874,780	+		Sama_2393	0.38	+0.5
2,874,781	-		Sama_2393	0.38	-1.4
2,874,804	-		Sama_2393	0.39	+0.1
2,874,835	+		Sama_2393	0.40	-1.1
2,874,836	-		Sama_2393	0.40	-0.3
2,874,836	-		Sama_2393	0.40	-2.1
2,874,856	-		Sama_2393	0.41	+0.8
2,874,856	-		Sama_2393	0.41	-1.3
2,874,856	-		Sama_2393	0.41	-0.9
2,874,896	+		Sama_2393	0.43	-0.1
2,874,896	+		Sama_2393	0.43	-0.8
2,874,897	-		Sama_2393	0.43	-0.5
2,874,899	+		Sama_2393	0.43	-0.0
2,874,899	+		Sama_2393	0.43	-0.5
2,874,899	+		Sama_2393	0.43	+1.7
2,874,899	+		Sama_2393	0.43	+0.5
2,874,900	-		Sama_2393	0.43	+0.3
2,874,900	-		Sama_2393	0.43	-1.0
2,874,900	-		Sama_2393	0.43	+1.7
2,874,900	-		Sama_2393	0.43	-0.6
2,874,900	-		Sama_2393	0.43	-0.6
2,874,900	-		Sama_2393	0.43	+1.0
2,874,900	-		Sama_2393	0.43	+1.0
2,874,900	-		Sama_2393	0.43	-1.0
2,874,939	-		Sama_2393	0.44	+0.4
2,874,939	-		Sama_2393	0.44	-0.1
2,874,939	-		Sama_2393	0.44	+1.0
2,874,939	-		Sama_2393	0.44	-0.3
2,874,968	+		Sama_2393	0.46	+0.5
2,875,111	+		Sama_2393	0.51	-0.6
2,875,165	+		Sama_2393	0.53	+0.7
2,875,165	+		Sama_2393	0.53	-0.9
2,875,167	+		Sama_2393	0.53	-0.6
2,875,167	+		Sama_2393	0.53	-1.7
2,875,168	-		Sama_2393	0.53	+0.4
2,875,168	-		Sama_2393	0.53	-1.6
2,875,168	-		Sama_2393	0.53	-0.2
2,875,206	+		Sama_2393	0.55	+0.4
2,875,207	-		Sama_2393	0.55	-0.0
2,875,207	-		Sama_2393	0.55	-0.9
2,875,267	+		Sama_2393	0.57	-0.6
2,875,268	-		Sama_2393	0.57	-0.2
2,875,268	-		Sama_2393	0.57	-1.8
2,875,268	-		Sama_2393	0.57	+0.2
2,875,269	+		Sama_2393	0.57	+0.1
2,875,269	+		Sama_2393	0.57	-0.5
2,875,270	-		Sama_2393	0.57	+2.7
2,875,270	-		Sama_2393	0.57	-0.8
2,875,284	+		Sama_2393	0.58	+0.1
2,875,284	+		Sama_2393	0.58	+0.4
2,875,284	+		Sama_2393	0.58	-0.4
2,875,284	+		Sama_2393	0.58	+0.3
2,875,284	+		Sama_2393	0.58	-0.0
2,875,285	-		Sama_2393	0.58	-0.3
2,875,285	-		Sama_2393	0.58	-0.6
2,875,315	+		Sama_2393	0.59	-0.2
2,875,371	+		Sama_2393	0.61	+0.3
2,875,372	-		Sama_2393	0.61	+0.3
2,875,372	-		Sama_2393	0.61	+1.2
2,875,372	-		Sama_2393	0.61	+0.1
2,875,383	+		Sama_2393	0.62	+0.2
2,875,384	-		Sama_2393	0.62	-1.3
2,875,413	+		Sama_2393	0.63	-0.7
2,875,431	+		Sama_2393	0.63	+0.4
2,875,455	+		Sama_2393	0.64	-0.1
2,875,455	+		Sama_2393	0.64	+0.7
2,875,455	+		Sama_2393	0.64	+0.7
2,875,456	-		Sama_2393	0.64	-1.4
2,875,456	-		Sama_2393	0.64	+0.4
2,875,456	-		Sama_2393	0.64	-0.8
2,875,456	-		Sama_2393	0.64	-1.1
2,875,456	-		Sama_2393	0.64	-0.3
2,875,556	+		Sama_2393	0.68	+0.9
2,875,556	+		Sama_2393	0.68	+1.0
2,875,556	+		Sama_2393	0.68	+0.1
2,875,556	+		Sama_2393	0.68	-1.0
2,875,557	-		Sama_2393	0.68	-0.6
2,875,557	-		Sama_2393	0.68	+0.7
2,875,560	+		Sama_2393	0.68	+0.8
2,875,560	+		Sama_2393	0.68	+0.1
2,875,560	+		Sama_2393	0.68	-0.2
2,875,561	-		Sama_2393	0.68	-0.2
2,875,561	-		Sama_2393	0.68	-0.6
2,875,561	-		Sama_2393	0.68	+0.3
2,875,561	-		Sama_2393	0.68	-1.4
2,875,561	-		Sama_2393	0.68	-1.1
2,875,561	-		Sama_2393	0.68	+0.9
2,875,566	+		Sama_2393	0.69	-0.0
2,875,566	+		Sama_2393	0.69	-2.3
2,875,566	+		Sama_2393	0.69	+0.1
2,875,566	+		Sama_2393	0.69	+0.9
2,875,566	+		Sama_2393	0.69	+0.1
2,875,566	+		Sama_2393	0.69	-0.3
2,875,567	-		Sama_2393	0.69	-0.2
2,875,567	-		Sama_2393	0.69	-0.3
2,875,567	-		Sama_2393	0.69	-1.0
2,875,567	-		Sama_2393	0.69	-0.1
2,875,570	+		Sama_2393	0.69	+0.5
2,875,570	+		Sama_2393	0.69	-0.7
2,875,571	-		Sama_2393	0.69	+0.9
2,875,571	-		Sama_2393	0.69	-1.5
2,875,571	-		Sama_2393	0.69	-0.2
2,875,620	+		Sama_2393	0.71	-0.2
2,875,623	+		Sama_2393	0.71	+0.7
2,875,624	-		Sama_2393	0.71	-0.6
2,875,624	-		Sama_2393	0.71	-0.7
2,875,659	+		Sama_2393	0.72	+1.0
2,875,659	+		Sama_2393	0.72	+0.4
2,875,659	+		Sama_2393	0.72	-0.6
2,875,659	+		Sama_2393	0.72	-1.4
2,875,659	+		Sama_2393	0.72	-1.8
2,875,659	+		Sama_2393	0.72	-0.1
2,875,659	+		Sama_2393	0.72	+0.3
2,875,659	+		Sama_2393	0.72	-0.2
2,875,659	+		Sama_2393	0.72	+1.7
2,875,659	+		Sama_2393	0.72	-0.7
2,875,660	-		Sama_2393	0.72	+2.3
2,875,660	-		Sama_2393	0.72	+0.5
2,875,660	-		Sama_2393	0.72	-0.4
2,875,660	-		Sama_2393	0.72	-0.6
2,875,660	-		Sama_2393	0.72	-2.0
2,875,660	-		Sama_2393	0.72	-1.9
2,875,660	-		Sama_2393	0.72	-0.5
2,875,660	-		Sama_2393	0.72	-0.6
2,875,660	-		Sama_2393	0.72	+0.1
2,875,660	-		Sama_2393	0.72	-2.2
2,875,660	-		Sama_2393	0.72	+1.1
2,875,660	-		Sama_2393	0.72	-1.5
2,875,664	+		Sama_2393	0.72	-0.8
2,875,665	-		Sama_2393	0.72	+1.1
2,875,665	-		Sama_2393	0.72	-0.1
2,875,711	-		Sama_2393	0.74	+2.3
2,875,735	+		Sama_2393	0.75	+1.1
2,875,761	+		Sama_2393	0.76	+0.7
2,875,761	+		Sama_2393	0.76	-0.2
2,875,762	-		Sama_2393	0.76	-1.6
2,875,844	-		Sama_2393	0.79	+0.3
2,875,852	+		Sama_2393	0.80	-2.0
2,875,852	+		Sama_2393	0.80	-0.9
2,875,852	+		Sama_2393	0.80	+1.4
2,875,858	+		Sama_2393	0.80	-2.9
2,875,859	-		Sama_2393	0.80	+0.5
2,875,859	-		Sama_2393	0.80	+0.7
2,875,887	+		Sama_2393	0.81	+0.5
2,875,888	-		Sama_2393	0.81	-0.3
2,875,888	-		Sama_2393	0.81	-0.3
2,875,888	-		Sama_2393	0.81	-1.1
2,875,952	-		Sama_2393	0.83	-1.6
2,876,169	+				+0.9
2,876,170	-				-0.1
2,876,170	-				+0.1
2,876,290	+				+0.4
2,876,290	+				+0.7
2,876,291	-				+0.1
2,876,409	-				-0.6
2,876,449	+				-0.3
2,876,450	-				+0.1
2,876,450	-				+0.2
2,876,592	-				-0.0
2,876,592	-				-0.8
2,876,592	-				-0.9
2,876,592	-				-0.7
2,876,599	-				-0.8
2,876,599	-				-0.1
2,876,641	-				-1.5
2,876,658	+				+0.8
2,876,694	-				-1.5
2,876,694	-				-1.6
2,876,694	-				-0.0
2,876,710	+				+0.0
2,876,710	+				-0.6
2,876,711	-				-0.8
2,876,711	-				+0.4
2,876,711	-				-1.3
2,876,711	-				+0.1
2,876,711	-				-1.6
2,876,766	+				-1.1
2,876,830	+				+0.1
2,876,830	+				-1.1
2,876,830	+				+0.3
2,876,831	-				+0.1
2,876,831	-				-1.3
2,876,936	-		Sama_2394	0.11	-1.8
2,876,951	+		Sama_2394	0.12	+0.1
2,876,951	+		Sama_2394	0.12	+0.1
2,876,951	+		Sama_2394	0.12	+1.7
2,876,951	+		Sama_2394	0.12	+0.6
2,876,951	+		Sama_2394	0.12	+0.9
2,876,952	-		Sama_2394	0.12	-0.4
2,876,952	-		Sama_2394	0.12	-2.1
2,876,952	-		Sama_2394	0.12	-0.1
2,876,952	-		Sama_2394	0.12	-1.3
2,876,952	-		Sama_2394	0.12	-2.0
2,876,952	-		Sama_2394	0.12	+0.1
2,876,952	-		Sama_2394	0.12	+0.6
2,876,952	-		Sama_2394	0.12	-1.3
2,876,952	-		Sama_2394	0.12	-0.3
2,876,952	-		Sama_2394	0.12	+0.7
2,876,986	+		Sama_2394	0.14	+0.3
2,876,986	+		Sama_2394	0.14	-0.2
2,876,986	+		Sama_2394	0.14	+0.7
2,876,987	-		Sama_2394	0.15	-1.5
2,876,987	-		Sama_2394	0.15	+0.1
2,877,045	+		Sama_2394	0.18	+0.1
2,877,046	-		Sama_2394	0.18	-0.6
2,877,093	+		Sama_2394	0.21	+0.2
2,877,147	+		Sama_2394	0.24	+0.5
2,877,147	+		Sama_2394	0.24	-0.9
2,877,147	+		Sama_2394	0.24	+0.3
2,877,148	-		Sama_2394	0.24	-1.2
2,877,148	-		Sama_2394	0.24	-1.2
2,877,148	-		Sama_2394	0.24	-0.7
2,877,148	-		Sama_2394	0.24	+0.6
2,877,166	+		Sama_2394	0.25	-0.6
2,877,166	+		Sama_2394	0.25	-0.5
2,877,167	-		Sama_2394	0.25	+2.2
2,877,167	-		Sama_2394	0.25	-1.6
2,877,339	-		Sama_2394	0.35	+0.7
2,877,339	-		Sama_2394	0.35	+1.5
2,877,339	-		Sama_2394	0.35	-1.0
2,877,383	-		Sama_2394	0.38	-0.0
2,877,383	-		Sama_2394	0.38	-0.0
2,877,383	-		Sama_2394	0.38	-1.5