Strain Fitness in Shewanella loihica PV-4 around Shew_3861

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,590,716	-				+0.2
4,590,882	+		Shew_3860	0.23	-0.1
4,590,882	+		Shew_3860	0.23	+0.5
4,591,116	-		Shew_3860	0.59	+0.1
4,591,147	+		Shew_3860	0.64	-0.2
4,591,190	+		Shew_3860	0.71	+0.2
4,591,289	-		Shew_3860	0.86	+0.4
4,591,456	+				-0.1
4,591,676	+		Shew_3861	0.13	-0.6
4,591,778	+		Shew_3861	0.28	-1.4
4,591,921	+		Shew_3861	0.48	-0.0
4,592,395	-				-0.0
4,592,459	-				-1.0
4,592,512	+				+0.1
4,592,547	+				-0.1
4,592,575	-				-1.1
4,592,582	-				+1.1
4,592,608	+				-0.0
4,592,641	-				+0.2
4,592,711	+				+1.0
4,592,719	-				+0.0
4,593,068	+				-0.1
4,593,073	+				+0.5
4,593,073	+				+0.7
4,593,075	-				+0.0
4,593,081	-				-0.3
4,593,081	-				-0.5
4,593,095	-				+0.5