Strain Fitness in Shewanella loihica PV-4 around Shew_2580

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,040,154	-				+0.1
3,040,288	+				-0.5
3,040,331	+				+0.2
3,040,354	+				-0.8
3,040,357	-				+0.3
3,040,390	-				+0.1
3,040,390	-				+0.1
3,040,722	+				+0.1
3,041,036	-				+0.1
3,041,395	-		Shew_2580	0.14	+0.0
3,041,587	-		Shew_2580	0.23	+0.1
3,041,602	+		Shew_2580	0.24	+0.4
3,041,802	-		Shew_2580	0.34	+0.0
3,041,861	-		Shew_2580	0.37	-0.3
3,041,879	+		Shew_2580	0.37	+0.1
3,041,879	+		Shew_2580	0.37	+1.0
3,042,064	-		Shew_2580	0.47	+0.5
3,042,295	+		Shew_2580	0.58	+0.7
3,042,468	+		Shew_2580	0.66	+0.2
3,042,628	-		Shew_2580	0.74	+0.6
3,042,628	+		Shew_2580	0.74	+0.6
3,042,684	+		Shew_2580	0.77	+0.2
3,042,692	-		Shew_2580	0.77	+0.2
3,042,737	-		Shew_2580	0.80	+0.3
3,042,759	+		Shew_2580	0.81	+1.7
3,042,999	+				+0.4
3,042,999	+				-0.0
3,043,373	-				+0.3
3,043,374	-				+0.2
3,043,389	+				-1.8
3,043,418	+				+0.5
3,043,532	+				+0.1
3,043,618	-		Shew_2581	0.13	+0.4
3,043,712	-		Shew_2581	0.18	+0.3
3,043,814	+		Shew_2581	0.22	+0.7
3,043,814	+		Shew_2581	0.22	-0.5
3,043,814	+		Shew_2581	0.22	+0.1
3,043,822	-		Shew_2581	0.23	-0.0
3,044,144	+		Shew_2581	0.38	+0.3