Strain Fitness in Shewanella loihica PV-4 around Shew_2531

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,986,033	+		Shew_2530	0.29	+0.3
2,986,164	+		Shew_2530	0.42	-0.3
2,986,164	+		Shew_2530	0.42	+0.6
2,986,582	+		Shew_2530	0.85	+0.5
2,986,682	+				+1.2
2,986,922	+				-1.1
2,986,951	-		Shew_2531	0.13	+0.4
2,987,068	-		Shew_2531	0.26	+0.3
2,987,331	+		Shew_2531	0.55	+0.4
2,987,331	+		Shew_2531	0.55	+0.4
2,987,692	-				-0.1
2,987,878	-				+0.1
2,987,894	+				+1.3
2,987,896	+				-0.0
2,987,906	+				-0.5
2,987,914	-				-0.5
2,987,914	-				+0.4
2,987,914	-				+0.6
2,987,915	-				-0.1
2,987,915	-				-0.2
2,987,921	+				+0.7
2,987,929	-				-0.2
2,987,961	+				+0.1
2,987,961	+				+0.9
2,988,190	+				-0.2
2,988,207	-				-0.3
2,988,347	+				+0.5
2,988,563	+				+0.1
2,988,563	+				-0.1
2,988,563	+				-0.4
2,988,563	+				-0.0
2,988,563	+				-1.5
2,988,563	+				+1.2
2,988,571	-				+0.0
2,988,571	-				-0.2
2,988,571	-				+0.6
2,988,571	-				+0.2
2,988,631	-				+0.3
2,988,631	-				+0.2
2,988,647	+				-0.3
2,988,655	-				+1.1