Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0656 and Shew_0657 are separated by 174 nucleotides Shew_0657 and Shew_0658 are separated by 291 nucleotides
Shew_0656: Shew_0656 - anaerobic nitric oxide reductase transcription regulator (RefSeq), at 743,996 to 745,531
_0656
Shew_0657: Shew_0657 - putative nitric oxide reductase (subunit B) transmembrane protein (RefSeq), at 745,706 to 747,997
_0657
Shew_0658: Shew_0658 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase (RefSeq), at 748,289 to 749,215
_0658
Position (kb) 745
746
747
748 Strain fitness (log2 ratio) -2
-1
0
1
2 at 744.773 kb on + strand, within Shew_0656 at 744.922 kb on + strand, within Shew_0656 at 745.193 kb on + strand, within Shew_0656 at 745.308 kb on - strand, within Shew_0656 at 745.308 kb on - strand, within Shew_0656 at 745.308 kb on - strand, within Shew_0656 at 745.969 kb on - strand, within Shew_0657 at 746.001 kb on + strand, within Shew_0657 at 746.009 kb on - strand, within Shew_0657 at 746.282 kb on - strand, within Shew_0657 at 746.419 kb on + strand, within Shew_0657 at 746.561 kb on + strand, within Shew_0657 at 746.610 kb on + strand, within Shew_0657 at 746.618 kb on - strand, within Shew_0657 at 746.835 kb on - strand, within Shew_0657 at 746.935 kb on + strand, within Shew_0657 at 746.943 kb on + strand, within Shew_0657 at 746.956 kb on - strand, within Shew_0657 at 747.286 kb on + strand, within Shew_0657 at 747.443 kb on + strand, within Shew_0657 at 747.484 kb on + strand, within Shew_0657 at 747.719 kb on - strand, within Shew_0657 at 747.751 kb on + strand, within Shew_0657 at 747.934 kb on + strand at 748.029 kb on + strand at 748.215 kb on - strand at 748.820 kb on + strand, within Shew_0658 at 748.946 kb on - strand, within Shew_0658
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 744,773 + Shew_0656 0.51 -0.1 744,922 + Shew_0656 0.60 -0.6 745,193 + Shew_0656 0.78 +0.2 745,308 - Shew_0656 0.85 -1.0 745,308 - Shew_0656 0.85 -0.1 745,308 - Shew_0656 0.85 -0.0 745,969 - Shew_0657 0.11 +0.2 746,001 + Shew_0657 0.13 +0.4 746,009 - Shew_0657 0.13 -0.1 746,282 - Shew_0657 0.25 +0.9 746,419 + Shew_0657 0.31 +0.1 746,561 + Shew_0657 0.37 +0.8 746,610 + Shew_0657 0.39 -0.1 746,618 - Shew_0657 0.40 +0.8 746,835 - Shew_0657 0.49 -0.2 746,935 + Shew_0657 0.54 +0.6 746,943 + Shew_0657 0.54 +0.3 746,956 - Shew_0657 0.55 +2.6 747,286 + Shew_0657 0.69 +0.6 747,443 + Shew_0657 0.76 +0.3 747,484 + Shew_0657 0.78 -0.2 747,719 - Shew_0657 0.88 -0.4 747,751 + Shew_0657 0.89 +0.3 747,934 + -0.3 748,029 + -0.3 748,215 - -0.7 748,820 + Shew_0658 0.57 -2.7 748,946 - Shew_0658 0.71 -0.0
Or see this region's nucleotide sequence