Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4220 and Dshi_4221 are separated by 1 nucleotides Dshi_4221 and Dshi_4222 are separated by 84 nucleotides Dshi_4222 and Dshi_4223 are separated by 72 nucleotides
Dshi_4220: Dshi_4220 - protein of unknown function DUF112 transmembrane (RefSeq), at 67,749 to 69,233
_4220
Dshi_4221: Dshi_4221 - 2-hydroxy-3-oxopropionate reductase (RefSeq), at 69,235 to 70,116
_4221
Dshi_4222: Dshi_4222 - hypothetical protein (RefSeq), at 70,201 to 70,617
_4222
Dshi_4223: Dshi_4223 - Ferritin Dps family protein (RefSeq), at 70,690 to 71,160
_4223
Position (kb)
69
70
71 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 68.237 kb on - strand, within Dshi_4220 at 68.245 kb on - strand, within Dshi_4220 at 68.498 kb on - strand, within Dshi_4220 at 68.596 kb on + strand, within Dshi_4220 at 68.748 kb on + strand, within Dshi_4220 at 68.919 kb on - strand, within Dshi_4220 at 68.944 kb on + strand, within Dshi_4220 at 69.021 kb on - strand, within Dshi_4220 at 69.066 kb on + strand, within Dshi_4220 at 69.162 kb on + strand at 69.162 kb on + strand at 69.242 kb on - strand at 69.357 kb on + strand, within Dshi_4221 at 69.528 kb on + strand, within Dshi_4221 at 69.623 kb on - strand, within Dshi_4221 at 69.728 kb on + strand at 69.865 kb on - strand, within Dshi_4221 at 70.014 kb on + strand, within Dshi_4221 at 70.014 kb on + strand, within Dshi_4221 at 70.224 kb on - strand at 70.283 kb on - strand at 70.283 kb on - strand, within Dshi_4222 at 70.416 kb on + strand, within Dshi_4222 at 70.591 kb on + strand at 70.713 kb on + strand at 70.880 kb on + strand, within Dshi_4223
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 68,237 - Dshi_4220 0.33 -0.2 68,245 - Dshi_4220 0.33 -2.7 68,498 - Dshi_4220 0.50 -2.2 68,596 + Dshi_4220 0.57 +0.8 68,748 + Dshi_4220 0.67 +0.8 68,919 - Dshi_4220 0.79 -2.2 68,944 + Dshi_4220 0.80 +1.6 69,021 - Dshi_4220 0.86 -1.7 69,066 + Dshi_4220 0.89 -2.3 69,162 + +0.4 69,162 + +2.4 69,242 - -3.2 69,357 + Dshi_4221 0.14 -1.7 69,528 + Dshi_4221 0.33 -0.2 69,623 - Dshi_4221 0.44 -1.2 69,728 + +0.8 69,865 - Dshi_4221 0.71 +0.8 70,014 + Dshi_4221 0.88 -1.6 70,014 + Dshi_4221 0.88 -1.2 70,224 - +1.8 70,283 - +2.4 70,283 - Dshi_4222 0.20 -2.5 70,416 + Dshi_4222 0.52 -2.0 70,591 + -0.7 70,713 + -1.9 70,880 + Dshi_4223 0.40 -1.7
Or see this region's nucleotide sequence