Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3971

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
31,721	+				+0.9
31,721	+				+1.6
31,745	-				+1.3
31,888	-				+4.2
31,921	-		Dshi_3969	0.11	-0.1
31,992	+		Dshi_3969	0.42	-1.0
31,997	+		Dshi_3969	0.44	-0.3
32,000	-		Dshi_3969	0.45	+0.3
32,015	-		Dshi_3969	0.52	+1.3
32,017	-		Dshi_3969	0.53	+0.4
32,017	-		Dshi_3969	0.53	-2.7
32,017	-		Dshi_3969	0.53	+1.1
32,017	-		Dshi_3969	0.53	-0.3
32,017	-		Dshi_3969	0.53	+0.2
32,017	-		Dshi_3969	0.53	-1.1
32,033	-		Dshi_3969	0.60	-0.1
32,068	-		Dshi_3969	0.75	+0.1
32,070	+		Dshi_3969	0.76	-0.3
32,078	-		Dshi_3969	0.79	-0.9
32,084	+		Dshi_3969	0.82	+0.5
32,089	+		Dshi_3969	0.84	+0.3
32,102	+				+1.0
32,108	+				-0.1
32,116	-				+1.3
32,135	+				+0.5
32,162	-				+0.9
32,185	-				-0.4
32,192	+				-1.0
32,242	+				-0.5
32,242	+				-0.3
32,261	-				-0.3
32,310	+				-1.1
32,318	-		Dshi_3970	0.10	-1.7
32,318	-		Dshi_3970	0.10	-2.1
32,318	-		Dshi_3970	0.10	-0.2
32,318	-		Dshi_3970	0.10	-0.2
32,364	-		Dshi_3970	0.28	+0.1
32,367	+		Dshi_3970	0.29	-0.8
32,367	+		Dshi_3970	0.29	-0.5
32,367	+		Dshi_3970	0.29	+0.3
32,367	+		Dshi_3970	0.29	-2.3
32,367	+		Dshi_3970	0.29	-4.0
32,367	+		Dshi_3970	0.29	-0.8
32,367	+		Dshi_3970	0.29	-1.3
32,375	-		Dshi_3970	0.32	-0.6
32,375	-		Dshi_3970	0.32	-0.3
32,375	-		Dshi_3970	0.32	-0.8
32,375	-		Dshi_3970	0.32	-0.1
32,375	-		Dshi_3970	0.32	-0.8
32,375	-		Dshi_3970	0.32	-0.1
32,375	-		Dshi_3970	0.32	-0.2
32,382	-		Dshi_3970	0.35	+1.0
32,382	-		Dshi_3970	0.35	-1.0
32,433	-		Dshi_3970	0.55	+1.9
32,469	+		Dshi_3970	0.69	-1.5
32,469	+		Dshi_3970	0.69	-0.7
32,476	-		Dshi_3970	0.71	+0.3
32,486	+		Dshi_3970	0.75	+0.0
32,489	-		Dshi_3970	0.76	+0.3
32,489	-		Dshi_3970	0.76	+0.4
32,642	+				+0.1
32,644	+				-0.4
32,652	-				-0.2
32,652	-				+0.3
32,652	-				-0.7
32,664	-				-0.6
32,686	-				-0.3
32,730	+		Dshi_3971	0.17	-1.0
32,730	+		Dshi_3971	0.17	+1.9
32,738	-		Dshi_3971	0.20	-0.9
32,749	+		Dshi_3971	0.23	+1.8
32,762	-		Dshi_3971	0.27	-0.8
32,762	-		Dshi_3971	0.27	-1.6
32,762	-		Dshi_3971	0.27	-0.7
32,789	+		Dshi_3971	0.36	-0.7
32,861	+		Dshi_3971	0.58	+3.2
32,876	+		Dshi_3971	0.63	+0.1
32,886	+		Dshi_3971	0.66	+1.6
32,899	-		Dshi_3971	0.70	-0.5
32,944	-		Dshi_3971	0.84	+2.2
32,953	-		Dshi_3971	0.87	+0.6
32,953	-		Dshi_3971	0.87	-0.5
33,001	+				-0.3
33,009	-				-0.9
33,016	-				+0.9
33,016	-				+0.1
33,098	+				-0.4
33,105	+				-0.1
33,114	+				-1.0
33,143	-				-0.1
33,214	+		Dshi_3972	0.21	-0.8
33,249	+		Dshi_3972	0.31	-2.0
33,266	+		Dshi_3972	0.36	-0.7
33,273	-		Dshi_3972	0.38	-1.3
33,384	+		Dshi_3972	0.69	-1.4
33,388	+		Dshi_3972	0.71	-0.7
33,388	+		Dshi_3972	0.71	-1.8
33,414	-		Dshi_3972	0.78	+0.6
33,441	-		Dshi_3972	0.86	-2.6
33,476	+				+1.2
33,481	+				-0.6
33,484	-				-0.7
33,499	-				-0.9
33,538	+				-1.6
33,543	+				-1.3
33,563	+				-1.6
33,563	+				+0.5
33,563	+				-1.1
33,581	-				-0.4
33,614	+		Dshi_3973	0.13	-0.2
33,614	+		Dshi_3973	0.13	-0.1
33,619	+		Dshi_3973	0.14	+0.5
33,619	+		Dshi_3973	0.14	-0.0
33,627	-		Dshi_3973	0.15	+1.5
33,627	-		Dshi_3973	0.15	-0.3
33,632	-		Dshi_3973	0.16	-0.4
33,662	-		Dshi_3973	0.21	-0.8
33,712	+		Dshi_3973	0.29	+0.3
33,712	+		Dshi_3973	0.29	-1.8
33,720	-		Dshi_3973	0.30	-1.3
33,720	-		Dshi_3973	0.30	-0.6
33,720	-		Dshi_3973	0.30	-0.1
33,766	+		Dshi_3973	0.38	-0.9
33,773	+		Dshi_3973	0.39	-0.4
33,778	+		Dshi_3973	0.40	-1.1
33,778	+		Dshi_3973	0.40	-0.2
33,778	+		Dshi_3973	0.40	-0.9
33,786	-		Dshi_3973	0.41	+0.0
33,786	-		Dshi_3973	0.41	-0.2
33,786	-		Dshi_3973	0.41	+1.0
33,822	+		Dshi_3973	0.47	-0.8
33,870	+		Dshi_3973	0.54	-0.7
33,892	-		Dshi_3973	0.58	-0.8
33,957	-		Dshi_3973	0.69	+0.2