Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3895

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
117,772	+		Dshi_3893	0.76	-0.2
117,801	-		Dshi_3893	0.81	+1.0
117,804	+		Dshi_3893	0.82	-2.9
117,804	+		Dshi_3893	0.82	-1.0
117,812	-		Dshi_3893	0.84	-0.1
117,823	+		Dshi_3893	0.86	+2.0
117,823	+		Dshi_3893	0.86	-0.2
117,850	-				-1.9
117,858	+				-0.7
117,883	-				-3.1
117,946	-				+0.9
118,069	-		Dshi_3894	0.21	-0.2
118,075	-		Dshi_3894	0.21	-0.5
118,133	+		Dshi_3894	0.28	-1.8
118,160	-		Dshi_3894	0.32	+0.4
118,183	-		Dshi_3894	0.35	+0.6
118,188	+		Dshi_3894	0.35	+0.5
118,188	+		Dshi_3894	0.35	-1.1
118,188	+		Dshi_3894	0.35	-0.8
118,188	-		Dshi_3894	0.35	+2.0
118,196	-		Dshi_3894	0.36	+0.0
118,197	-		Dshi_3894	0.36	-2.3
118,198	-		Dshi_3894	0.36	-2.6
118,212	+		Dshi_3894	0.38	+0.1
118,310	-		Dshi_3894	0.50	+4.9
118,449	+		Dshi_3894	0.67	-0.9
118,449	+		Dshi_3894	0.67	+0.2
118,455	-		Dshi_3894	0.68	+1.7
118,455	-		Dshi_3894	0.68	-0.6
118,457	-		Dshi_3894	0.68	+0.0
118,493	+		Dshi_3894	0.73	+0.4
118,511	-		Dshi_3894	0.75	-1.0
118,534	-		Dshi_3894	0.78	+0.6
118,539	-		Dshi_3894	0.78	-0.4
118,549	-		Dshi_3894	0.79	-2.0
118,590	-		Dshi_3894	0.84	+2.6
118,590	-		Dshi_3894	0.84	+0.2
118,625	+		Dshi_3894	0.89	+1.2
118,628	+		Dshi_3894	0.89	-1.4
118,628	-		Dshi_3894	0.89	-0.2
118,643	-				-2.0
118,647	+				-0.1
118,648	+				-0.4
118,681	-				-0.3
118,707	+				-0.0
118,711	+				-0.8
118,719	-				-0.7
118,727	-				+0.4
118,740	+				+0.8
118,755	-				-0.0
118,805	+				+0.5
118,825	-				-0.3
118,834	+				-0.8
118,888	+				+0.4
118,984	+		Dshi_3895	0.14	+2.8
118,992	-		Dshi_3895	0.15	-1.0
119,038	+		Dshi_3895	0.17	+1.2
119,088	+		Dshi_3895	0.20	-3.4
119,101	-		Dshi_3895	0.21	+2.4
119,101	-		Dshi_3895	0.21	-0.1
119,131	+		Dshi_3895	0.22	-0.7
119,144	+		Dshi_3895	0.23	-2.7
119,166	+		Dshi_3895	0.24	-1.0
119,187	+		Dshi_3895	0.25	-2.0
119,251	-		Dshi_3895	0.29	+3.0
119,251	-		Dshi_3895	0.29	+0.4
119,258	+		Dshi_3895	0.29	-0.6
119,266	-		Dshi_3895	0.30	-1.3
119,266	-		Dshi_3895	0.30	-0.6
119,266	-		Dshi_3895	0.30	+0.1
119,279	+		Dshi_3895	0.31	-1.7
119,279	+		Dshi_3895	0.31	+0.2
119,281	-		Dshi_3895	0.31	-1.1
119,300	+		Dshi_3895	0.32	+1.2
119,308	+		Dshi_3895	0.32	+2.0
119,347	+		Dshi_3895	0.34	+0.6
119,369	-		Dshi_3895	0.36	+0.7
119,401	-		Dshi_3895	0.37	+1.4
119,428	+		Dshi_3895	0.39	+0.1
119,432	-		Dshi_3895	0.39	-3.1
119,452	+		Dshi_3895	0.40	+1.1
119,503	-		Dshi_3895	0.43	-0.4
119,537	+		Dshi_3895	0.45	+1.4
119,543	-		Dshi_3895	0.45	-0.3
119,562	+		Dshi_3895	0.46	+0.1
119,585	-		Dshi_3895	0.48	+0.7
119,610	+		Dshi_3895	0.49	-1.4
119,618	-		Dshi_3895	0.50	+0.6
119,648	-		Dshi_3895	0.51	+0.5
119,659	-		Dshi_3895	0.52	+0.7
119,677	+		Dshi_3895	0.53	+0.6
119,720	+		Dshi_3895	0.55	+3.2
119,728	-		Dshi_3895	0.56	-0.3
119,728	-		Dshi_3895	0.56	+0.6
119,741	+		Dshi_3895	0.57	-0.5
119,782	-		Dshi_3895	0.59	-2.4
119,809	+		Dshi_3895	0.60	-2.7
119,850	-		Dshi_3895	0.63	-1.9
119,857	+		Dshi_3895	0.63	+0.4
119,886	-		Dshi_3895	0.65	+0.6
119,943	+		Dshi_3895	0.68	+3.2
119,952	+		Dshi_3895	0.68	+0.9
119,978	+		Dshi_3895	0.70	+0.3
119,990	+		Dshi_3895	0.70	+0.3
120,009	+		Dshi_3895	0.72	+0.1
120,017	-		Dshi_3895	0.72	-0.9
120,072	+		Dshi_3895	0.75	+0.9
120,086	+		Dshi_3895	0.76	+1.1
120,086	+		Dshi_3895	0.76	+0.9
120,091	+		Dshi_3895	0.76	-0.6
120,094	-		Dshi_3895	0.76	+2.0
120,099	-		Dshi_3895	0.77	+0.1
120,141	+		Dshi_3895	0.79	-0.1
120,141	+		Dshi_3895	0.79	-1.9
120,163	+		Dshi_3895	0.80	+0.5
120,164	+		Dshi_3895	0.80	+0.4
120,178	-		Dshi_3895	0.81	-0.1
120,178	-				+0.4
120,179	+		Dshi_3895	0.81	-0.5
120,187	-		Dshi_3895	0.82	-0.6
120,214	+		Dshi_3895	0.83	+1.0
120,214	+		Dshi_3895	0.83	-0.2
120,219	+		Dshi_3895	0.83	-0.1
120,219	+		Dshi_3895	0.83	-0.7
120,227	-		Dshi_3895	0.84	-1.2
120,227	-		Dshi_3895	0.84	+0.1
120,227	-		Dshi_3895	0.84	-0.6
120,227	-		Dshi_3895	0.84	-0.0
120,227	-		Dshi_3895	0.84	-0.3
120,297	-		Dshi_3895	0.88	+0.3
120,335	+		Dshi_3895	0.90	-1.0
120,357	+				+1.9
120,365	-				+1.2
120,365	-				-1.6
120,426	-				+0.1
120,438	+				+0.0
120,451	+				-0.5
120,513	-				+0.4
120,592	+		Dshi_3896	0.11	+0.3
120,628	-		Dshi_3896	0.16	-1.7
120,630	+		Dshi_3896	0.17	-3.5
120,694	+		Dshi_3896	0.26	-0.8
120,702	-		Dshi_3896	0.27	+2.6
120,702	-		Dshi_3896	0.27	+0.9
120,732	+		Dshi_3896	0.31	+1.0
120,740	-		Dshi_3896	0.32	+1.0
120,740	-		Dshi_3896	0.32	+0.3
120,742	+		Dshi_3896	0.32	+1.8
120,742	-		Dshi_3896	0.32	+0.1
120,876	-		Dshi_3896	0.51	+0.5
120,886	-		Dshi_3896	0.52	-1.3
120,917	+		Dshi_3896	0.56	-0.8
120,925	-		Dshi_3896	0.58	+2.0
120,930	-		Dshi_3896	0.58	+0.6
121,000	-		Dshi_3896	0.68	-0.4
121,007	+		Dshi_3896	0.69	+0.3
121,034	+		Dshi_3896	0.73	+0.1
121,037	-		Dshi_3896	0.73	-0.4
121,125	+		Dshi_3896	0.85	+0.9
121,129	+		Dshi_3896	0.86	-0.1
121,154	+		Dshi_3896	0.89	+1.6
121,154	+		Dshi_3896	0.89	-0.1
121,154	+		Dshi_3896	0.89	-1.3
121,162	-				-1.3
121,162	-				+0.6
121,332	+				-2.8
121,360	+				-0.6
121,368	-		Dshi_3897	0.11	-0.3
121,368	-		Dshi_3897	0.11	-3.6
121,368	-		Dshi_3897	0.11	+0.7
121,499	+		Dshi_3897	0.35	+0.4