Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3800
Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,761 | - | Dshi_3798 | 0.64 | -2.4 | |
6,909 | - | -1.6 | |||
6,914 | - | -1.7 | |||
6,965 | + | -2.1 | |||
7,195 | + | Dshi_3799 | 0.19 | -2.9 | |
7,251 | + | Dshi_3799 | 0.28 | -1.8 | |
7,393 | + | Dshi_3799 | 0.52 | -0.6 | |
7,633 | - | -1.1 | |||
7,690 | - | -0.8 | |||
7,874 | - | Dshi_3800 | 0.31 | +2.0 | |
8,039 | + | Dshi_3800 | 0.58 | -3.1 | |
8,043 | + | Dshi_3800 | 0.58 | +0.0 | |
8,238 | - | -1.1 | |||
8,377 | - | -1.1 | |||
8,457 | - | +0.9 | |||
8,515 | + | -1.6 | |||
8,599 | - | Dshi_3801 | 0.11 | +0.4 | |
8,612 | + | Dshi_3801 | 0.12 | -0.4 | |
8,890 | + | Dshi_3801 | 0.24 | -2.4 | |
9,092 | + | Dshi_3801 | 0.34 | -2.7 | |
9,100 | - | Dshi_3801 | 0.34 | +0.8 | |
9,100 | - | Dshi_3801 | 0.34 | +2.0 | |
9,169 | + | Dshi_3801 | 0.37 | +1.7 | |
9,169 | + | Dshi_3801 | 0.37 | -0.6 | |
9,229 | - | Dshi_3801 | 0.40 | +0.7 | |
9,234 | - | Dshi_3801 | 0.40 | -1.1 | |
9,264 | - | Dshi_3801 | 0.42 | -0.6 |
Or see this region's nucleotide sequence