Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3129 and Dshi_3130 overlap by 4 nucleotides Dshi_3130 and Dshi_3131 overlap by 4 nucleotides Dshi_3131 and Dshi_3132 overlap by 1 nucleotides
Dshi_3129: Dshi_3129 - ABC transporter related (RefSeq), at 3,297,477 to 3,298,550
_3129
Dshi_3130: Dshi_3130 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,298,547 to 3,299,410
_3130
Dshi_3131: Dshi_3131 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,299,407 to 3,300,204
_3131
Dshi_3132: Dshi_3132 - hypothetical protein (RefSeq), at 3,300,204 to 3,300,602
_3132
Position (kb)
3298
3299
3300 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3297.547 kb on - strand at 3297.758 kb on + strand, within Dshi_3129 at 3297.760 kb on + strand, within Dshi_3129 at 3297.766 kb on - strand, within Dshi_3129 at 3298.226 kb on - strand, within Dshi_3129 at 3298.348 kb on + strand, within Dshi_3129 at 3298.356 kb on - strand, within Dshi_3129 at 3298.389 kb on + strand, within Dshi_3129 at 3298.497 kb on + strand at 3298.597 kb on - strand at 3298.666 kb on - strand, within Dshi_3130 at 3298.827 kb on - strand, within Dshi_3130 at 3298.827 kb on - strand, within Dshi_3130 at 3298.908 kb on + strand, within Dshi_3130 at 3299.022 kb on - strand, within Dshi_3130 at 3299.056 kb on + strand, within Dshi_3130 at 3299.099 kb on - strand, within Dshi_3130 at 3299.130 kb on - strand, within Dshi_3130 at 3299.166 kb on - strand, within Dshi_3130 at 3299.244 kb on - strand, within Dshi_3130 at 3299.305 kb on + strand, within Dshi_3130 at 3299.492 kb on - strand, within Dshi_3131 at 3299.534 kb on + strand, within Dshi_3131 at 3299.771 kb on - strand, within Dshi_3131 at 3299.806 kb on + strand, within Dshi_3131 at 3299.842 kb on + strand, within Dshi_3131 at 3299.850 kb on - strand, within Dshi_3131 at 3299.865 kb on - strand, within Dshi_3131 at 3299.902 kb on + strand, within Dshi_3131 at 3300.018 kb on + strand, within Dshi_3131 at 3300.069 kb on - strand, within Dshi_3131 at 3300.165 kb on + strand at 3300.180 kb on + strand at 3300.315 kb on + strand, within Dshi_3132
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 3,297,547 - -1.6 3,297,758 + Dshi_3129 0.26 +1.0 3,297,760 + Dshi_3129 0.26 -2.5 3,297,766 - Dshi_3129 0.27 -0.7 3,298,226 - Dshi_3129 0.70 -1.1 3,298,348 + Dshi_3129 0.81 -0.6 3,298,356 - Dshi_3129 0.82 -0.9 3,298,389 + Dshi_3129 0.85 +0.5 3,298,497 + -0.5 3,298,597 - -1.3 3,298,666 - Dshi_3130 0.14 -0.1 3,298,827 - Dshi_3130 0.32 -0.1 3,298,827 - Dshi_3130 0.32 -1.5 3,298,908 + Dshi_3130 0.42 +0.9 3,299,022 - Dshi_3130 0.55 -1.5 3,299,056 + Dshi_3130 0.59 -1.0 3,299,099 - Dshi_3130 0.64 -0.6 3,299,130 - Dshi_3130 0.67 -1.1 3,299,166 - Dshi_3130 0.72 -1.1 3,299,244 - Dshi_3130 0.81 -2.1 3,299,305 + Dshi_3130 0.88 -1.1 3,299,492 - Dshi_3131 0.11 -0.7 3,299,534 + Dshi_3131 0.16 +0.9 3,299,771 - Dshi_3131 0.46 +0.6 3,299,806 + Dshi_3131 0.50 -0.5 3,299,842 + Dshi_3131 0.55 +0.9 3,299,850 - Dshi_3131 0.56 -0.9 3,299,865 - Dshi_3131 0.57 -0.7 3,299,902 + Dshi_3131 0.62 +0.2 3,300,018 + Dshi_3131 0.77 -0.4 3,300,069 - Dshi_3131 0.83 +0.9 3,300,165 + -0.3 3,300,180 + +3.7 3,300,315 + Dshi_3132 0.28 -2.0
Or see this region's nucleotide sequence