Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3126 and Dshi_3127 are separated by 154 nucleotides Dshi_3127 and Dshi_3128 are separated by 72 nucleotides
Dshi_3126: Dshi_3126 - putative iron(III) transport system substrate-binding protein (RefSeq), at 3,293,446 to 3,294,447
_3126
Dshi_3127: Dshi_3127 - extracellular solute-binding protein family 1 (RefSeq), at 3,294,602 to 3,296,341
_3127
Dshi_3128: Dshi_3128 - ABC transporter related (RefSeq), at 3,296,414 to 3,297,475
_3128
Position (kb)
3294
3295
3296
3297 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3293.657 kb on - strand, within Dshi_3126 at 3293.704 kb on - strand, within Dshi_3126 at 3293.746 kb on + strand, within Dshi_3126 at 3293.799 kb on - strand, within Dshi_3126 at 3293.829 kb on - strand, within Dshi_3126 at 3293.878 kb on + strand, within Dshi_3126 at 3293.912 kb on - strand, within Dshi_3126 at 3293.968 kb on - strand, within Dshi_3126 at 3294.002 kb on + strand, within Dshi_3126 at 3294.183 kb on - strand, within Dshi_3126 at 3294.190 kb on - strand, within Dshi_3126 at 3294.340 kb on - strand, within Dshi_3126 at 3294.341 kb on + strand, within Dshi_3126 at 3294.370 kb on - strand at 3294.381 kb on + strand at 3294.386 kb on + strand at 3294.403 kb on - strand at 3294.421 kb on + strand at 3294.444 kb on - strand at 3294.468 kb on + strand at 3294.574 kb on - strand at 3294.629 kb on - strand at 3294.756 kb on + strand at 3294.810 kb on - strand, within Dshi_3127 at 3294.913 kb on + strand, within Dshi_3127 at 3294.930 kb on + strand, within Dshi_3127 at 3294.930 kb on + strand, within Dshi_3127 at 3295.022 kb on - strand, within Dshi_3127 at 3295.068 kb on + strand, within Dshi_3127 at 3295.156 kb on + strand, within Dshi_3127 at 3295.156 kb on + strand, within Dshi_3127 at 3295.162 kb on - strand, within Dshi_3127 at 3295.164 kb on - strand, within Dshi_3127 at 3295.193 kb on + strand, within Dshi_3127 at 3295.355 kb on - strand, within Dshi_3127 at 3295.363 kb on + strand, within Dshi_3127 at 3295.464 kb on + strand, within Dshi_3127 at 3295.484 kb on + strand, within Dshi_3127 at 3295.568 kb on + strand, within Dshi_3127 at 3295.626 kb on + strand, within Dshi_3127 at 3295.629 kb on - strand, within Dshi_3127 at 3295.777 kb on - strand, within Dshi_3127 at 3295.904 kb on + strand, within Dshi_3127 at 3296.171 kb on + strand at 3296.207 kb on + strand at 3296.246 kb on - strand at 3296.391 kb on + strand at 3296.423 kb on - strand at 3296.461 kb on + strand at 3296.573 kb on + strand, within Dshi_3128 at 3296.593 kb on - strand, within Dshi_3128 at 3296.598 kb on + strand, within Dshi_3128 at 3296.697 kb on + strand, within Dshi_3128 at 3296.700 kb on - strand, within Dshi_3128 at 3296.703 kb on - strand, within Dshi_3128 at 3296.718 kb on - strand, within Dshi_3128 at 3296.834 kb on + strand, within Dshi_3128 at 3296.834 kb on + strand, within Dshi_3128 at 3296.834 kb on + strand, within Dshi_3128 at 3296.834 kb on + strand, within Dshi_3128 at 3296.834 kb on + strand, within Dshi_3128 at 3296.834 kb on + strand, within Dshi_3128 at 3296.834 kb on + strand, within Dshi_3128 at 3296.842 kb on - strand, within Dshi_3128 at 3296.842 kb on - strand, within Dshi_3128 at 3296.842 kb on - strand, within Dshi_3128 at 3296.842 kb on - strand, within Dshi_3128 at 3296.842 kb on - strand, within Dshi_3128 at 3296.842 kb on - strand, within Dshi_3128 at 3296.958 kb on + strand, within Dshi_3128 at 3296.963 kb on + strand, within Dshi_3128 at 3296.973 kb on + strand, within Dshi_3128 at 3297.116 kb on - strand, within Dshi_3128 at 3297.299 kb on + strand, within Dshi_3128 at 3297.316 kb on + strand, within Dshi_3128
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 3,293,657 - Dshi_3126 0.21 -3.1 3,293,704 - Dshi_3126 0.26 -1.3 3,293,746 + Dshi_3126 0.30 +0.9 3,293,799 - Dshi_3126 0.35 +0.0 3,293,829 - Dshi_3126 0.38 +1.3 3,293,878 + Dshi_3126 0.43 +1.4 3,293,912 - Dshi_3126 0.47 +1.3 3,293,968 - Dshi_3126 0.52 -0.7 3,294,002 + Dshi_3126 0.55 -0.3 3,294,183 - Dshi_3126 0.74 -1.5 3,294,190 - Dshi_3126 0.74 -2.7 3,294,340 - Dshi_3126 0.89 -2.4 3,294,341 + Dshi_3126 0.89 -0.1 3,294,370 - -1.4 3,294,381 + +0.9 3,294,386 + -0.9 3,294,403 - +0.3 3,294,421 + +0.3 3,294,444 - +0.0 3,294,468 + +0.9 3,294,574 - -1.1 3,294,629 - +0.3 3,294,756 + +0.9 3,294,810 - Dshi_3127 0.12 +1.3 3,294,913 + Dshi_3127 0.18 +0.9 3,294,930 + Dshi_3127 0.19 +1.9 3,294,930 + Dshi_3127 0.19 +0.0 3,295,022 - Dshi_3127 0.24 +1.9 3,295,068 + Dshi_3127 0.27 -0.6 3,295,156 + Dshi_3127 0.32 +2.5 3,295,156 + Dshi_3127 0.32 +0.2 3,295,162 - Dshi_3127 0.32 +0.9 3,295,164 - Dshi_3127 0.32 +0.5 3,295,193 + Dshi_3127 0.34 -0.9 3,295,355 - Dshi_3127 0.43 -0.1 3,295,363 + Dshi_3127 0.44 -0.1 3,295,464 + Dshi_3127 0.50 -3.1 3,295,484 + Dshi_3127 0.51 -1.9 3,295,568 + Dshi_3127 0.56 -1.3 3,295,626 + Dshi_3127 0.59 -1.7 3,295,629 - Dshi_3127 0.59 +0.1 3,295,777 - Dshi_3127 0.68 -0.3 3,295,904 + Dshi_3127 0.75 -0.3 3,296,171 + -1.4 3,296,207 + -1.6 3,296,246 - +0.9 3,296,391 + -3.5 3,296,423 - -0.4 3,296,461 + +0.9 3,296,573 + Dshi_3128 0.15 +0.7 3,296,593 - Dshi_3128 0.17 +1.5 3,296,598 + Dshi_3128 0.17 -1.1 3,296,697 + Dshi_3128 0.27 -2.2 3,296,700 - Dshi_3128 0.27 -0.3 3,296,703 - Dshi_3128 0.27 -1.4 3,296,718 - Dshi_3128 0.29 +0.9 3,296,834 + Dshi_3128 0.40 -2.4 3,296,834 + Dshi_3128 0.40 -1.9 3,296,834 + Dshi_3128 0.40 -1.2 3,296,834 + Dshi_3128 0.40 -1.5 3,296,834 + Dshi_3128 0.40 -2.4 3,296,834 + Dshi_3128 0.40 -0.1 3,296,834 + Dshi_3128 0.40 -1.6 3,296,842 - Dshi_3128 0.40 -0.7 3,296,842 - Dshi_3128 0.40 +0.9 3,296,842 - Dshi_3128 0.40 -1.1 3,296,842 - Dshi_3128 0.40 +0.3 3,296,842 - Dshi_3128 0.40 -0.8 3,296,842 - Dshi_3128 0.40 -1.4 3,296,958 + Dshi_3128 0.51 +0.0 3,296,963 + Dshi_3128 0.52 +0.9 3,296,973 + Dshi_3128 0.53 +2.5 3,297,116 - Dshi_3128 0.66 -0.9 3,297,299 + Dshi_3128 0.83 +0.4 3,297,316 + Dshi_3128 0.85 -0.7
Or see this region's nucleotide sequence