Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2903 and Dshi_2904 overlap by 4 nucleotides Dshi_2904 and Dshi_2905 overlap by 1 nucleotides Dshi_2905 and Dshi_2906 overlap by 4 nucleotides
Dshi_2903: Dshi_2903 - hypothetical protein (RefSeq), at 3,059,093 to 3,061,177
_2903
Dshi_2904: Dshi_2904 - hypothetical protein (RefSeq), at 3,061,174 to 3,063,948
_2904
Dshi_2905: Dshi_2905 - hypothetical protein (RefSeq), at 3,063,948 to 3,064,850
_2905
Dshi_2906: Dshi_2906 - ATPase associated with various cellular activities AAA_3 (RefSeq), at 3,064,847 to 3,065,854
_2906
Position (kb)
3061
3062
3063
3064 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3060.245 kb on + strand, within Dshi_2903 at 3060.253 kb on + strand, within Dshi_2903 at 3060.422 kb on + strand, within Dshi_2903 at 3060.468 kb on + strand, within Dshi_2903 at 3060.504 kb on - strand, within Dshi_2903 at 3060.727 kb on - strand, within Dshi_2903 at 3060.864 kb on - strand, within Dshi_2903 at 3061.431 kb on + strand at 3061.645 kb on - strand, within Dshi_2904 at 3061.698 kb on - strand, within Dshi_2904 at 3061.725 kb on - strand, within Dshi_2904 at 3061.788 kb on + strand, within Dshi_2904 at 3061.820 kb on - strand, within Dshi_2904 at 3061.847 kb on - strand, within Dshi_2904 at 3061.896 kb on - strand, within Dshi_2904 at 3061.962 kb on - strand, within Dshi_2904 at 3062.106 kb on - strand, within Dshi_2904 at 3062.219 kb on + strand, within Dshi_2904 at 3062.297 kb on + strand, within Dshi_2904 at 3062.309 kb on - strand, within Dshi_2904 at 3062.491 kb on + strand, within Dshi_2904 at 3062.565 kb on - strand, within Dshi_2904 at 3062.573 kb on + strand, within Dshi_2904 at 3062.799 kb on + strand, within Dshi_2904 at 3062.853 kb on + strand, within Dshi_2904 at 3062.903 kb on + strand, within Dshi_2904 at 3063.053 kb on - strand, within Dshi_2904 at 3063.161 kb on - strand, within Dshi_2904 at 3063.431 kb on - strand, within Dshi_2904 at 3063.433 kb on + strand, within Dshi_2904 at 3063.433 kb on + strand, within Dshi_2904 at 3063.466 kb on - strand, within Dshi_2904 at 3063.472 kb on - strand, within Dshi_2904 at 3063.646 kb on + strand, within Dshi_2904 at 3063.911 kb on - strand at 3063.933 kb on + strand at 3063.984 kb on - strand at 3064.026 kb on + strand at 3064.033 kb on + strand at 3064.070 kb on - strand, within Dshi_2905 at 3064.242 kb on + strand, within Dshi_2905 at 3064.242 kb on + strand, within Dshi_2905 at 3064.323 kb on + strand, within Dshi_2905 at 3064.362 kb on + strand, within Dshi_2905 at 3064.676 kb on + strand, within Dshi_2905 at 3064.693 kb on + strand, within Dshi_2905 at 3064.826 kb on + strand at 3064.834 kb on - strand at 3064.935 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 3,060,245 + Dshi_2903 0.55 -1.6 3,060,253 + Dshi_2903 0.56 -0.7 3,060,422 + Dshi_2903 0.64 -0.6 3,060,468 + Dshi_2903 0.66 -3.0 3,060,504 - Dshi_2903 0.68 -1.4 3,060,727 - Dshi_2903 0.78 -3.3 3,060,864 - Dshi_2903 0.85 -1.4 3,061,431 + -0.5 3,061,645 - Dshi_2904 0.17 -1.9 3,061,698 - Dshi_2904 0.19 -1.0 3,061,725 - Dshi_2904 0.20 +1.0 3,061,788 + Dshi_2904 0.22 -0.9 3,061,820 - Dshi_2904 0.23 +1.0 3,061,847 - Dshi_2904 0.24 -0.0 3,061,896 - Dshi_2904 0.26 -0.3 3,061,962 - Dshi_2904 0.28 -1.0 3,062,106 - Dshi_2904 0.34 +2.6 3,062,219 + Dshi_2904 0.38 -2.2 3,062,297 + Dshi_2904 0.40 -2.3 3,062,309 - Dshi_2904 0.41 +2.0 3,062,491 + Dshi_2904 0.47 -2.2 3,062,565 - Dshi_2904 0.50 +3.3 3,062,573 + Dshi_2904 0.50 -0.7 3,062,799 + Dshi_2904 0.59 -0.0 3,062,853 + Dshi_2904 0.61 +2.6 3,062,903 + Dshi_2904 0.62 -1.8 3,063,053 - Dshi_2904 0.68 +1.0 3,063,161 - Dshi_2904 0.72 -1.6 3,063,431 - Dshi_2904 0.81 -1.6 3,063,433 + Dshi_2904 0.81 -2.3 3,063,433 + Dshi_2904 0.81 +1.0 3,063,466 - Dshi_2904 0.83 -2.0 3,063,472 - Dshi_2904 0.83 +1.0 3,063,646 + Dshi_2904 0.89 +1.0 3,063,911 - +0.6 3,063,933 + -1.3 3,063,984 - -0.0 3,064,026 + +2.0 3,064,033 + +1.0 3,064,070 - Dshi_2905 0.14 -0.7 3,064,242 + Dshi_2905 0.33 -0.5 3,064,242 + Dshi_2905 0.33 +1.0 3,064,323 + Dshi_2905 0.42 -0.6 3,064,362 + Dshi_2905 0.46 -0.3 3,064,676 + Dshi_2905 0.81 +2.0 3,064,693 + Dshi_2905 0.83 +3.3 3,064,826 + +3.0 3,064,834 - -1.7 3,064,935 - +1.2
Or see this region's nucleotide sequence