Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2866 and Dshi_2867 are separated by 11 nucleotides Dshi_2867 and Dshi_2868 are separated by 299 nucleotides Dshi_2868 and Dshi_2869 are separated by 9 nucleotides Dshi_2869 and Dshi_2870 are separated by 74 nucleotides
Dshi_2866: Dshi_2866 - Succinate dehydrogenase hydrophobic membrane anchor (RefSeq), at 3,023,515 to 3,023,886
_2866
Dshi_2867: Dshi_2867 - Succinate dehydrogenase cytochrome b556 subunit (RefSeq), at 3,023,898 to 3,024,281
_2867
Dshi_2868: Dshi_2868 - cytochrome c class II (RefSeq), at 3,024,581 to 3,025,060
_2868
Dshi_2869: Dshi_2869 - Gluconate 2-dehydrogenase (acceptor) (RefSeq), at 3,025,070 to 3,025,948
_2869
Dshi_2870: Dshi_2870 - hypothetical protein (RefSeq), at 3,026,023 to 3,026,229
_2870
Position (kb)
3024
3025
3026 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3024.467 kb on - strand at 3024.608 kb on + strand at 3024.659 kb on + strand, within Dshi_2868 at 3024.659 kb on + strand, within Dshi_2868 at 3024.729 kb on - strand, within Dshi_2868 at 3024.745 kb on + strand, within Dshi_2868 at 3024.993 kb on - strand, within Dshi_2868 at 3024.996 kb on + strand, within Dshi_2868 at 3025.006 kb on + strand, within Dshi_2868 at 3025.099 kb on + strand at 3025.149 kb on - strand at 3025.215 kb on - strand, within Dshi_2869 at 3025.270 kb on + strand, within Dshi_2869 at 3025.283 kb on + strand, within Dshi_2869 at 3025.353 kb on - strand, within Dshi_2869 at 3025.370 kb on - strand, within Dshi_2869 at 3025.393 kb on + strand, within Dshi_2869 at 3025.443 kb on - strand, within Dshi_2869 at 3025.543 kb on - strand, within Dshi_2869 at 3025.564 kb on - strand, within Dshi_2869 at 3025.574 kb on - strand, within Dshi_2869 at 3025.574 kb on - strand, within Dshi_2869 at 3025.619 kb on - strand, within Dshi_2869 at 3025.649 kb on + strand, within Dshi_2869 at 3025.669 kb on + strand, within Dshi_2869 at 3025.767 kb on + strand, within Dshi_2869 at 3025.814 kb on - strand, within Dshi_2869 at 3025.908 kb on - strand at 3025.920 kb on + strand at 3025.952 kb on - strand at 3026.025 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 3,024,467 - -0.9 3,024,608 + -2.5 3,024,659 + Dshi_2868 0.16 +0.9 3,024,659 + Dshi_2868 0.16 +0.9 3,024,729 - Dshi_2868 0.31 -1.0 3,024,745 + Dshi_2868 0.34 +0.9 3,024,993 - Dshi_2868 0.86 -0.4 3,024,996 + Dshi_2868 0.86 -0.7 3,025,006 + Dshi_2868 0.89 +2.5 3,025,099 + +2.5 3,025,149 - +0.7 3,025,215 - Dshi_2869 0.16 -2.7 3,025,270 + Dshi_2869 0.23 -0.2 3,025,283 + Dshi_2869 0.24 -2.2 3,025,353 - Dshi_2869 0.32 -2.5 3,025,370 - Dshi_2869 0.34 +0.9 3,025,393 + Dshi_2869 0.37 +1.9 3,025,443 - Dshi_2869 0.42 -1.1 3,025,543 - Dshi_2869 0.54 +0.5 3,025,564 - Dshi_2869 0.56 -0.7 3,025,574 - Dshi_2869 0.57 -0.7 3,025,574 - Dshi_2869 0.57 +2.5 3,025,619 - Dshi_2869 0.62 +2.5 3,025,649 + Dshi_2869 0.66 -0.7 3,025,669 + Dshi_2869 0.68 -1.3 3,025,767 + Dshi_2869 0.79 -1.1 3,025,814 - Dshi_2869 0.85 -0.4 3,025,908 - -1.6 3,025,920 + -0.5 3,025,952 - +0.9 3,026,025 + -0.6
Or see this region's nucleotide sequence