Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2474 and Dshi_2475 are separated by 4 nucleotides Dshi_2475 and Dshi_2476 are separated by 646 nucleotides
Dshi_2474: Dshi_2474 - S-adenosyl-methyltransferase MraW (RefSeq), at 2,626,611 to 2,627,612
_2474
Dshi_2475: Dshi_2475 - protein of unknown function UPF0040 (RefSeq), at 2,627,617 to 2,628,129
_2475
Dshi_2476: Dshi_2476 - septum formation inhibitor-activating ATPase-like protein (RefSeq), at 2,628,776 to 2,629,864
_2476
Position (kb)
2627
2628
2629 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2626.630 kb on + strand at 2626.655 kb on - strand at 2626.772 kb on + strand, within Dshi_2474 at 2627.037 kb on - strand, within Dshi_2474 at 2627.210 kb on - strand, within Dshi_2474 at 2627.526 kb on - strand at 2627.853 kb on - strand, within Dshi_2475 at 2627.950 kb on + strand, within Dshi_2475 at 2627.957 kb on - strand, within Dshi_2475 at 2628.008 kb on - strand, within Dshi_2475 at 2628.254 kb on - strand at 2628.541 kb on - strand at 2628.675 kb on - strand at 2628.735 kb on - strand at 2628.759 kb on + strand at 2628.774 kb on + strand at 2628.782 kb on - strand at 2628.782 kb on - strand at 2628.782 kb on - strand at 2628.782 kb on - strand at 2628.782 kb on - strand at 2628.802 kb on - strand at 2628.802 kb on - strand at 2628.837 kb on - strand at 2628.854 kb on - strand at 2628.964 kb on + strand, within Dshi_2476 at 2629.000 kb on - strand, within Dshi_2476 at 2629.000 kb on - strand, within Dshi_2476 at 2629.008 kb on + strand, within Dshi_2476 at 2629.014 kb on + strand, within Dshi_2476 at 2629.019 kb on + strand, within Dshi_2476 at 2629.080 kb on + strand, within Dshi_2476 at 2629.127 kb on + strand, within Dshi_2476
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 2,626,630 + +2.1 2,626,655 - +2.1 2,626,772 + Dshi_2474 0.16 -1.8 2,627,037 - Dshi_2474 0.43 +0.5 2,627,210 - Dshi_2474 0.60 +0.5 2,627,526 - -1.1 2,627,853 - Dshi_2475 0.46 -1.1 2,627,950 + Dshi_2475 0.65 -2.1 2,627,957 - Dshi_2475 0.66 +0.5 2,628,008 - Dshi_2475 0.76 -1.5 2,628,254 - -0.5 2,628,541 - -3.2 2,628,675 - -0.5 2,628,735 - -0.5 2,628,759 + -0.1 2,628,774 + +1.3 2,628,782 - -2.3 2,628,782 - +0.5 2,628,782 - -2.7 2,628,782 - +1.7 2,628,782 - -0.3 2,628,802 - +0.0 2,628,802 - -2.1 2,628,837 - +0.9 2,628,854 - -0.8 2,628,964 + Dshi_2476 0.17 -3.3 2,629,000 - Dshi_2476 0.21 +0.5 2,629,000 - Dshi_2476 0.21 +2.5 2,629,008 + Dshi_2476 0.21 -3.5 2,629,014 + Dshi_2476 0.22 -0.5 2,629,019 + Dshi_2476 0.22 -2.1 2,629,080 + Dshi_2476 0.28 -0.5 2,629,127 + Dshi_2476 0.32 -1.1
Or see this region's nucleotide sequence