Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2199

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
2,325,766	-		Dshi_2197	0.88	-0.8
2,325,766	-		Dshi_2197	0.88	-2.0
2,325,804	+				-3.4
2,325,869	-				-0.3
2,325,954	+				-0.3
2,325,969	+				+0.3
2,325,995	+				+0.3
2,326,003	-				+1.9
2,326,003	-				-0.0
2,326,018	+				+0.3
2,326,084	+				-2.9
2,326,142	+		Dshi_2198	0.22	-2.7
2,326,258	+		Dshi_2198	0.46	+0.3
2,326,271	+		Dshi_2198	0.49	+0.3
2,326,372	-		Dshi_2198	0.70	-0.7
2,326,607	-				+0.3
2,326,712	+				-2.9
2,326,785	+				-2.2
2,326,790	+				-2.6
2,326,798	-				+0.3
2,326,798	-				-2.1
2,326,827	-		Dshi_2199	0.13	-0.7
2,326,908	-		Dshi_2199	0.25	-0.7
2,326,921	+		Dshi_2199	0.27	+0.3
2,326,931	+		Dshi_2199	0.28	+0.6
2,327,017	-		Dshi_2199	0.41	-0.7
2,327,059	+		Dshi_2199	0.47	-1.7
2,327,216	+		Dshi_2199	0.70	-0.3
2,327,226	+		Dshi_2199	0.71	-2.5
2,327,235	+		Dshi_2199	0.72	+0.3
2,327,344	+		Dshi_2199	0.88	-2.5
2,327,385	+				-0.8
2,327,440	-				+0.3
2,327,503	-				-0.0
2,327,503	-				-2.3
2,327,503	-				-2.7
2,327,509	+				-1.0
2,327,517	-				+0.3
2,327,532	+				-3.1
2,327,593	+		Dshi_2200	0.15	-1.6
2,327,595	+		Dshi_2200	0.16	+2.3
2,327,603	-		Dshi_2200	0.17	-3.7
2,327,603	-		Dshi_2200	0.17	+1.3
2,327,603	-		Dshi_2200	0.17	-2.5
2,327,603	-		Dshi_2200	0.17	-1.7
2,327,713	+		Dshi_2200	0.36	-0.1
2,327,730	+		Dshi_2200	0.39	-3.8
2,327,769	-		Dshi_2200	0.45	+0.3
2,327,797	+		Dshi_2200	0.50	+2.9
2,327,797	+		Dshi_2200	0.50	-1.1
2,327,888	-		Dshi_2200	0.65	-0.7
2,327,906	-		Dshi_2200	0.68	-3.3
2,327,912	+		Dshi_2200	0.69	-2.5
2,327,929	+		Dshi_2200	0.72	-1.7
2,327,929	+		Dshi_2200	0.72	+0.3
2,327,932	-		Dshi_2200	0.73	-1.3
2,327,939	+		Dshi_2200	0.74	-0.2
2,328,055	+				-0.3
2,328,068	-				-1.1
2,328,076	+				+0.9
2,328,084	-				-1.8
2,328,085	-				+0.3
2,328,145	-		Dshi_2201	0.12	-1.4
2,328,221	+		Dshi_2201	0.29	-2.0
2,328,232	+		Dshi_2201	0.31	-2.1
2,328,316	-		Dshi_2201	0.50	+0.1
2,328,343	-		Dshi_2201	0.56	+2.3
2,328,387	+		Dshi_2201	0.66	-3.4
2,328,395	+		Dshi_2201	0.68	-3.1
2,328,395	-		Dshi_2201	0.68	-1.5
2,328,406	+		Dshi_2201	0.70	-1.3