Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2156 and Dshi_2157 are separated by 274 nucleotides Dshi_2157 and Dshi_2158 are separated by 99 nucleotides
Dshi_2156: Dshi_2156 - Fructose-bisphosphate aldolase (RefSeq), at 2,285,294 to 2,286,178
_2156
Dshi_2157: Dshi_2157 - Septum formation initiator (RefSeq), at 2,286,453 to 2,286,755
_2157
Dshi_2158: Dshi_2158 - Pyruvate dehydrogenase (acetyl-transferring) (RefSeq), at 2,286,855 to 2,287,850
_2158
Position (kb)
2286
2287 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 2285.491 kb on + strand, within Dshi_2156 at 2285.617 kb on + strand, within Dshi_2156 at 2285.617 kb on + strand, within Dshi_2156 at 2285.669 kb on - strand, within Dshi_2156 at 2285.702 kb on + strand, within Dshi_2156 at 2285.748 kb on - strand, within Dshi_2156 at 2285.782 kb on + strand, within Dshi_2156 at 2285.790 kb on - strand, within Dshi_2156 at 2285.908 kb on + strand, within Dshi_2156 at 2285.914 kb on + strand, within Dshi_2156 at 2285.946 kb on - strand, within Dshi_2156 at 2286.012 kb on + strand, within Dshi_2156 at 2286.195 kb on - strand at 2286.250 kb on - strand at 2286.285 kb on - strand at 2286.378 kb on - strand at 2286.416 kb on - strand at 2286.450 kb on + strand at 2286.749 kb on + strand at 2286.836 kb on + strand at 2286.859 kb on - strand at 2286.962 kb on + strand, within Dshi_2158 at 2286.962 kb on + strand, within Dshi_2158 at 2286.973 kb on - strand, within Dshi_2158 at 2286.988 kb on - strand, within Dshi_2158 at 2287.006 kb on - strand, within Dshi_2158 at 2287.006 kb on - strand, within Dshi_2158 at 2287.044 kb on + strand, within Dshi_2158 at 2287.246 kb on - strand, within Dshi_2158 at 2287.254 kb on + strand, within Dshi_2158 at 2287.274 kb on + strand, within Dshi_2158 at 2287.287 kb on - strand, within Dshi_2158 at 2287.337 kb on + strand, within Dshi_2158 at 2287.372 kb on - strand, within Dshi_2158 at 2287.438 kb on - strand, within Dshi_2158 at 2287.469 kb on + strand, within Dshi_2158 at 2287.486 kb on + strand, within Dshi_2158 at 2287.560 kb on + strand, within Dshi_2158
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 2,285,491 + Dshi_2156 0.22 -2.2 2,285,617 + Dshi_2156 0.36 -3.6 2,285,617 + Dshi_2156 0.36 +0.3 2,285,669 - Dshi_2156 0.42 -2.0 2,285,702 + Dshi_2156 0.46 -2.5 2,285,748 - Dshi_2156 0.51 -3.9 2,285,782 + Dshi_2156 0.55 -5.4 2,285,790 - Dshi_2156 0.56 -3.5 2,285,908 + Dshi_2156 0.69 -5.2 2,285,914 + Dshi_2156 0.70 -1.7 2,285,946 - Dshi_2156 0.74 -0.7 2,286,012 + Dshi_2156 0.81 -3.4 2,286,195 - +0.7 2,286,250 - -1.1 2,286,285 - -1.2 2,286,378 - -0.2 2,286,416 - -0.2 2,286,450 + -0.8 2,286,749 + +0.0 2,286,836 + -0.6 2,286,859 - -1.1 2,286,962 + Dshi_2158 0.11 -0.7 2,286,962 + Dshi_2158 0.11 +0.1 2,286,973 - Dshi_2158 0.12 -0.7 2,286,988 - Dshi_2158 0.13 -0.3 2,287,006 - Dshi_2158 0.15 +0.1 2,287,006 - Dshi_2158 0.15 +1.8 2,287,044 + Dshi_2158 0.19 -0.3 2,287,246 - Dshi_2158 0.39 -0.4 2,287,254 + Dshi_2158 0.40 +1.3 2,287,274 + Dshi_2158 0.42 +0.9 2,287,287 - Dshi_2158 0.43 +2.7 2,287,337 + Dshi_2158 0.48 -1.9 2,287,372 - Dshi_2158 0.52 +2.9 2,287,438 - Dshi_2158 0.59 -0.5 2,287,469 + Dshi_2158 0.62 +0.2 2,287,486 + Dshi_2158 0.63 -0.1 2,287,560 + Dshi_2158 0.71 -1.1
Or see this region's nucleotide sequence