Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1804
Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,875,006 | + | -1.9 | |||
1,875,794 | + | +0.4 | |||
1,875,809 | + | +0.4 | |||
1,875,917 | - | +2.0 | |||
1,875,936 | - | +4.1 | |||
1,876,085 | + | -0.9 | |||
1,876,093 | - | +0.4 | |||
1,876,171 | + | Dshi_1804 | 0.12 | -0.6 | |
1,876,477 | - | Dshi_1804 | 0.26 | -3.8 | |
1,876,842 | - | Dshi_1804 | 0.44 | -0.6 | |
1,876,842 | - | Dshi_1804 | 0.44 | +0.4 | |
1,876,891 | + | Dshi_1804 | 0.46 | -2.1 | |
1,876,899 | - | Dshi_1804 | 0.47 | -1.1 | |
1,876,899 | - | Dshi_1804 | 0.47 | +0.4 | |
1,876,938 | + | Dshi_1804 | 0.48 | -1.9 | |
1,876,957 | - | Dshi_1804 | 0.49 | +1.4 | |
1,877,052 | + | Dshi_1804 | 0.54 | -0.9 | |
1,877,075 | + | Dshi_1804 | 0.55 | +0.2 | |
1,877,221 | + | Dshi_1804 | 0.62 | -2.1 | |
1,877,376 | - | Dshi_1804 | 0.69 | +0.4 | |
1,877,423 | - | Dshi_1804 | 0.72 | +0.2 | |
1,877,462 | - | Dshi_1804 | 0.74 | -0.1 | |
1,877,823 | + | -0.2 | |||
1,877,823 | + | -0.7 | |||
1,877,891 | - | -0.6 | |||
1,877,940 | - | +0.4 | |||
1,877,950 | - | -1.1 | |||
1,877,952 | + | -1.3 | |||
1,877,952 | + | -2.4 |
Or see this region's nucleotide sequence