Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1243
Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,288,595 | - | -0.3 | |||
1,288,630 | + | +0.0 | |||
1,288,638 | - | -2.5 | |||
1,288,656 | + | -0.8 | |||
1,288,662 | - | -0.2 | |||
1,288,728 | + | Dshi_1242 | 0.12 | -0.9 | |
1,288,753 | - | Dshi_1242 | 0.14 | +2.9 | |
1,288,783 | - | Dshi_1242 | 0.18 | +0.1 | |
1,288,927 | - | Dshi_1242 | 0.34 | +0.8 | |
1,288,939 | - | Dshi_1242 | 0.35 | -0.0 | |
1,288,952 | - | Dshi_1242 | 0.37 | +2.9 | |
1,289,009 | + | Dshi_1242 | 0.43 | +0.5 | |
1,289,197 | - | Dshi_1242 | 0.64 | +0.5 | |
1,289,254 | + | Dshi_1242 | 0.70 | -0.5 | |
1,289,257 | - | Dshi_1242 | 0.71 | -0.9 | |
1,289,262 | - | Dshi_1242 | 0.71 | -0.5 | |
1,289,291 | + | Dshi_1242 | 0.74 | +1.2 | |
1,289,674 | - | Dshi_1243 | 0.20 | -0.4 | |
1,289,833 | + | Dshi_1243 | 0.41 | -0.9 | |
1,289,887 | + | Dshi_1243 | 0.48 | -0.5 | |
1,290,110 | + | Dshi_1243 | 0.76 | -0.2 | |
1,290,118 | - | Dshi_1243 | 0.77 | -0.8 | |
1,290,205 | + | Dshi_1243 | 0.89 | +0.3 | |
1,290,208 | - | Dshi_1243 | 0.89 | -1.5 | |
1,290,339 | - | -0.6 | |||
1,290,380 | + | +0.1 | |||
1,290,563 | + | Dshi_1244 | 0.16 | +0.3 | |
1,291,182 | - | Dshi_1244 | 0.52 | +0.4 | |
1,291,243 | + | Dshi_1244 | 0.56 | +0.3 | |
1,291,251 | - | Dshi_1244 | 0.56 | +0.1 | |
1,291,274 | - | Dshi_1244 | 0.57 | -0.6 |
Or see this region's nucleotide sequence