Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0743 and Dshi_0744 are separated by 81 nucleotides Dshi_0744 and Dshi_0745 are separated by 188 nucleotides Dshi_0745 and Dshi_0746 are separated by 97 nucleotides
Dshi_0743: Dshi_0743 - MscS Mechanosensitive ion channel (RefSeq), at 750,674 to 752,056
_0743
Dshi_0744: Dshi_0744 - prolyl-tRNA synthetase (RefSeq), at 752,138 to 753,475
_0744
Dshi_0745: Dshi_0745 - Redoxin domain protein (RefSeq), at 753,664 to 754,239
_0745
Dshi_0746: Dshi_0746 - MIP family channel protein (RefSeq), at 754,337 to 755,023
_0746
Position (kb) 752
753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 751.194 kb on - strand, within Dshi_0743 at 751.260 kb on + strand, within Dshi_0743 at 751.261 kb on + strand, within Dshi_0743 at 751.268 kb on - strand, within Dshi_0743 at 751.425 kb on - strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.487 kb on - strand, within Dshi_0743 at 751.519 kb on - strand, within Dshi_0743 at 751.539 kb on - strand, within Dshi_0743 at 751.576 kb on + strand, within Dshi_0743 at 751.582 kb on + strand, within Dshi_0743 at 751.595 kb on + strand, within Dshi_0743 at 751.608 kb on - strand, within Dshi_0743 at 751.609 kb on - strand, within Dshi_0743 at 751.705 kb on + strand, within Dshi_0743 at 751.712 kb on - strand, within Dshi_0743 at 751.712 kb on - strand, within Dshi_0743 at 751.723 kb on - strand, within Dshi_0743 at 751.792 kb on - strand, within Dshi_0743 at 751.888 kb on - strand, within Dshi_0743 at 752.033 kb on + strand at 752.078 kb on + strand at 753.477 kb on - strand at 753.492 kb on + strand at 753.537 kb on - strand at 753.574 kb on - strand at 753.644 kb on + strand at 753.652 kb on - strand at 753.678 kb on - strand at 753.758 kb on - strand, within Dshi_0745 at 753.796 kb on + strand, within Dshi_0745 at 753.825 kb on + strand, within Dshi_0745 at 753.876 kb on + strand, within Dshi_0745 at 753.908 kb on - strand, within Dshi_0745 at 753.972 kb on - strand, within Dshi_0745 at 754.086 kb on + strand, within Dshi_0745 at 754.105 kb on + strand, within Dshi_0745 at 754.223 kb on - strand at 754.223 kb on - strand at 754.337 kb on - strand at 754.469 kb on - strand, within Dshi_0746 at 754.475 kb on + strand, within Dshi_0746
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 751,194 - Dshi_0743 0.38 -1.8 751,260 + Dshi_0743 0.42 -2.2 751,261 + Dshi_0743 0.42 +0.1 751,268 - Dshi_0743 0.43 -0.8 751,425 - Dshi_0743 0.54 +2.4 751,479 + Dshi_0743 0.58 -0.4 751,479 + Dshi_0743 0.58 -2.2 751,487 - Dshi_0743 0.59 -2.2 751,519 - Dshi_0743 0.61 +0.8 751,539 - Dshi_0743 0.63 -2.5 751,576 + Dshi_0743 0.65 -0.5 751,582 + Dshi_0743 0.66 -0.4 751,595 + Dshi_0743 0.67 +0.8 751,608 - Dshi_0743 0.68 -1.5 751,609 - Dshi_0743 0.68 -1.5 751,705 + Dshi_0743 0.75 +0.8 751,712 - Dshi_0743 0.75 +0.8 751,712 - Dshi_0743 0.75 -1.0 751,723 - Dshi_0743 0.76 +0.2 751,792 - Dshi_0743 0.81 +0.8 751,888 - Dshi_0743 0.88 +3.1 752,033 + -2.0 752,078 + -0.8 753,477 - -0.8 753,492 + +0.5 753,537 - +0.8 753,574 - -0.4 753,644 + -1.1 753,652 - -1.7 753,678 - +0.5 753,758 - Dshi_0745 0.16 +0.5 753,796 + Dshi_0745 0.23 +0.5 753,825 + Dshi_0745 0.28 -1.3 753,876 + Dshi_0745 0.37 -0.2 753,908 - Dshi_0745 0.42 +1.8 753,972 - Dshi_0745 0.53 -0.5 754,086 + Dshi_0745 0.73 -1.7 754,105 + Dshi_0745 0.77 -1.0 754,223 - -1.0 754,223 - +1.2 754,337 - +2.4 754,469 - Dshi_0746 0.19 -2.4 754,475 + Dshi_0746 0.20 -2.8
Or see this region's nucleotide sequence