Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0205 and Dshi_0206 overlap by 8 nucleotides Dshi_0206 and Dshi_0207 are separated by 80 nucleotides Dshi_0207 and Dshi_0208 are separated by 10 nucleotides Dshi_0208 and Dshi_0209 are separated by 37 nucleotides
Dshi_0205: Dshi_0205 - protein of unknown function DUF81 (RefSeq), at 203,871 to 204,635
_0205
Dshi_0206: Dshi_0206 - hypothetical protein (RefSeq), at 204,628 to 205,515
_0206
Dshi_0207: Dshi_0207 - Phosphotransferase system, phosphocarrier protein HPr (RefSeq), at 205,596 to 205,865
_0207
Dshi_0208: Dshi_0208 - PTS system fructose subfamily IIA component (RefSeq), at 205,876 to 206,265
_0208
Dshi_0209: Dshi_0209 - hypothetical protein (RefSeq), at 206,303 to 207,205
_0209
Position (kb) 204
205
206 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 203.735 kb on - strand at 203.991 kb on - strand, within Dshi_0205 at 204.028 kb on + strand, within Dshi_0205 at 204.160 kb on + strand, within Dshi_0205 at 204.383 kb on + strand, within Dshi_0205 at 204.480 kb on - strand, within Dshi_0205 at 204.603 kb on + strand at 204.754 kb on + strand, within Dshi_0206 at 204.762 kb on - strand, within Dshi_0206 at 204.882 kb on + strand, within Dshi_0206 at 204.999 kb on + strand, within Dshi_0206 at 205.048 kb on + strand, within Dshi_0206 at 205.099 kb on - strand, within Dshi_0206 at 205.141 kb on + strand, within Dshi_0206 at 205.296 kb on - strand, within Dshi_0206 at 205.348 kb on - strand, within Dshi_0206 at 205.353 kb on - strand, within Dshi_0206 at 205.370 kb on + strand, within Dshi_0206 at 205.430 kb on - strand at 205.457 kb on + strand at 205.483 kb on - strand at 205.552 kb on + strand at 205.555 kb on - strand at 205.589 kb on - strand at 205.652 kb on - strand, within Dshi_0207 at 205.830 kb on - strand, within Dshi_0207 at 205.873 kb on + strand at 205.881 kb on - strand at 205.881 kb on - strand at 205.882 kb on - strand at 205.882 kb on - strand at 205.897 kb on + strand at 205.947 kb on - strand, within Dshi_0208 at 206.273 kb on + strand at 206.299 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 203,735 - +3.7 203,991 - Dshi_0205 0.16 -1.4 204,028 + Dshi_0205 0.21 -1.9 204,160 + Dshi_0205 0.38 -1.8 204,383 + Dshi_0205 0.67 +0.9 204,480 - Dshi_0205 0.80 -0.1 204,603 + -0.7 204,754 + Dshi_0206 0.14 -1.6 204,762 - Dshi_0206 0.15 -0.9 204,882 + Dshi_0206 0.29 +0.4 204,999 + Dshi_0206 0.42 +0.8 205,048 + Dshi_0206 0.47 +0.2 205,099 - Dshi_0206 0.53 -0.1 205,141 + Dshi_0206 0.58 -0.5 205,296 - Dshi_0206 0.75 +2.2 205,348 - Dshi_0206 0.81 -2.7 205,353 - Dshi_0206 0.82 +0.9 205,370 + Dshi_0206 0.84 -0.4 205,430 - -0.9 205,457 + -2.6 205,483 - -0.4 205,552 + +2.9 205,555 - -3.5 205,589 - +0.6 205,652 - Dshi_0207 0.21 -2.7 205,830 - Dshi_0207 0.87 -1.3 205,873 + +2.5 205,881 - -2.0 205,881 - +2.9 205,882 - -1.9 205,882 - -2.6 205,897 + -1.3 205,947 - Dshi_0208 0.18 +0.4 206,273 + +0.9 206,299 + -2.3
Or see this region's nucleotide sequence