Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0150 and Dshi_0151 are separated by 37 nucleotides Dshi_0151 and Dshi_0152 overlap by 4 nucleotides Dshi_0152 and Dshi_0153 are separated by 80 nucleotides
Dshi_0150: Dshi_0150 - Lytic transglycosylase catalytic (RefSeq), at 149,400 to 151,349
_0150
Dshi_0151: Dshi_0151 - protein of unknown function DUF6 transmembrane (RefSeq), at 151,387 to 152,265
_0151
Dshi_0152: Dshi_0152 - protein of unknown function DUF752 (RefSeq), at 152,262 to 152,954
_0152
Dshi_0153: Dshi_0153 - FAD dependent oxidoreductase (RefSeq), at 153,035 to 154,093
_0153
Position (kb) 151
152
153 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 151.306 kb on - strand at 151.419 kb on + strand at 151.442 kb on + strand at 151.464 kb on + strand at 151.517 kb on + strand, within Dshi_0151 at 151.525 kb on - strand, within Dshi_0151 at 151.543 kb on + strand, within Dshi_0151 at 151.546 kb on - strand, within Dshi_0151 at 151.663 kb on + strand, within Dshi_0151 at 151.671 kb on - strand, within Dshi_0151 at 151.776 kb on - strand, within Dshi_0151 at 151.992 kb on - strand, within Dshi_0151 at 152.189 kb on + strand at 152.263 kb on + strand at 152.328 kb on - strand at 152.455 kb on + strand, within Dshi_0152 at 152.749 kb on + strand, within Dshi_0152 at 152.782 kb on + strand, within Dshi_0152 at 152.786 kb on - strand, within Dshi_0152 at 152.801 kb on + strand, within Dshi_0152 at 152.902 kb on - strand at 152.907 kb on - strand at 152.921 kb on + strand at 152.958 kb on + strand at 152.966 kb on - strand at 152.973 kb on + strand at 153.097 kb on - strand at 153.108 kb on + strand at 153.118 kb on + strand at 153.126 kb on - strand at 153.143 kb on - strand, within Dshi_0153 at 153.145 kb on - strand, within Dshi_0153
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 151,306 - -1.9 151,419 + +2.9 151,442 + -0.1 151,464 + -2.4 151,517 + Dshi_0151 0.15 -1.1 151,525 - Dshi_0151 0.16 +0.1 151,543 + Dshi_0151 0.18 -0.1 151,546 - Dshi_0151 0.18 +2.5 151,663 + Dshi_0151 0.31 +0.2 151,671 - Dshi_0151 0.32 +3.3 151,776 - Dshi_0151 0.44 +0.7 151,992 - Dshi_0151 0.69 -2.6 152,189 + +0.9 152,263 + -1.4 152,328 - -1.9 152,455 + Dshi_0152 0.28 -1.1 152,749 + Dshi_0152 0.70 -1.4 152,782 + Dshi_0152 0.75 +0.9 152,786 - Dshi_0152 0.76 +0.9 152,801 + Dshi_0152 0.78 -1.9 152,902 - +1.3 152,907 - -2.2 152,921 + +0.9 152,958 + -1.9 152,966 - -1.2 152,973 + -1.6 153,097 - -1.4 153,108 + +0.9 153,118 + +0.9 153,126 - -0.6 153,143 - Dshi_0153 0.10 +0.8 153,145 - Dshi_0153 0.10 +0.9
Or see this region's nucleotide sequence