Strain Fitness in Marinobacter adhaerens HP15 around HP15_482

Experiment: a-Ketoglutaric

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_481 and HP15_482 are separated by 211 nucleotidesHP15_482 and HP15_483 are separated by 72 nucleotides HP15_481: HP15_481 - sporulation domain protein, at 492,114 to 493,601 _481 HP15_482: HP15_482 - glutamate synthase subunit alpha, at 493,813 to 498,261 _482 HP15_483: HP15_483 - oxidoreductase Fe-S binding subunit, at 498,334 to 499,752 _483 Position (kb) 493 494 495 496 497 498 499Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 492.827 kb on + strand, within HP15_481at 492.842 kb on + strand, within HP15_481at 492.884 kb on - strand, within HP15_481at 493.111 kb on - strand, within HP15_481at 493.169 kb on + strand, within HP15_481at 493.177 kb on - strand, within HP15_481at 493.359 kb on + strand, within HP15_481at 493.401 kb on - strand, within HP15_481at 493.401 kb on - strand, within HP15_481at 493.403 kb on - strand, within HP15_481at 493.429 kb on + strand, within HP15_481at 493.437 kb on - strand, within HP15_481at 493.456 kb on - strandat 493.456 kb on - strandat 493.572 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric
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492,827 + HP15_481 0.48 -0.1
492,842 + HP15_481 0.49 -1.6
492,884 - HP15_481 0.52 +1.7
493,111 - HP15_481 0.67 -2.3
493,169 + HP15_481 0.71 +0.3
493,177 - HP15_481 0.71 +2.3
493,359 + HP15_481 0.84 +0.1
493,401 - HP15_481 0.86 +1.8
493,401 - HP15_481 0.86 -0.0
493,403 - HP15_481 0.87 -0.3
493,429 + HP15_481 0.88 -3.3
493,437 - HP15_481 0.89 -0.9
493,456 - +1.6
493,456 - +1.6
493,572 + +1.7

Or see this region's nucleotide sequence